RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 MYRFLQ96LU7 910 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 FUZQ9BT04 418 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 HERC2P3Q9BVR0 1158 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 GPR62Q9BZJ7 368 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 UCKL1Q9NWZ5 548 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ST14Q9Y5Y6 855 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 RNGTTO60942 597 aaKnown RBP18.36■□□□□ 0.53
COL27A1-207ENST00000494090 CD9P21926 228 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ETV4P43268 484 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 SNX29P2Q8IUI4 249 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ARHGAP9Q9BRR9 750 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ENAMQ9NRM1 1142 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 PAK1IP1Q9NWT1 392 aaPredicted RBP18.36■□□□□ 0.53
COL27A1-207ENST00000494090 TOPAZ1Q8N9V7 1692 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 BMP2P12643 396 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 RNH1P13489 461 aaKnown RBP18.36■□□□□ 0.53
COL27A1-207ENST00000494090 MYF6P23409 242 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 GNG2P59768 71 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 PMS2P3Q13401 168 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 SLC27A4Q6P1M0 643 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ZFR2Q9UPR6 939 aaKnown RBP18.36■□□□□ 0.53
COL27A1-207ENST00000494090 C2orf92A0A1B0GVN3 265 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ISPDA4D126 451 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 STC2O76061 302 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 HMGCLP35914 325 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 GMPRP36959 345 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 VSX2P58304 361 aaPredicted RBP18.36■□□□□ 0.53
COL27A1-207ENST00000494090 CLRN1P58418 232 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ACTC1P68032 377 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 ACTA1P68133 377 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 RIN1Q13671 783 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 PXYLP1Q8TE99 480 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 KCNN1Q92952 543 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 RELTQ969Z4 430 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 HS6ST2Q96MM7 605 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 PTCHD1Q96NR3 888 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 DEFB126Q9BYW3 111 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 PCTPQ9UKL6 214 aa18.36■□□□□ 0.53
COL27A1-207ENST00000494090 PAK4O96013 591 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 HOXD8P13378 290 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 DRD2P14416 443 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GRK5P34947 590 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 CAPZA1P52907 286 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 NPRL3Q12980 569 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 CYP27C1Q4G0S4 372 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 RANBP10Q6VN20 620 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 TP53INP2Q8IXH6 220 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GALNT12Q8IXK2 581 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 SCP2D1Q9UJQ7 156 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 CYP8B1Q9UNU6 501 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 PLEKHA6Q9Y2H5 1048 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 A0A1B0GVC2 190 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 MECP2P51608 486 aaKnown RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 HERV-K104P61576 105 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 ZNF440Q8IYI8 595 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 ZNF689Q96CS4 500 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 ABCD2Q9UBJ2 740 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 MT-ND2P03891 347 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 OR12D1P0DN82 309 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 S1PR1P21453 382 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 CD68P34810 354 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GPR143P51810 404 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 SCGB2B2Q4G0G5 96 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GLT8D1Q68CQ7 371 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 B3GNT9Q6UX72 402 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 OR52B6Q8NGF0 335 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 OR5M3Q8NGP4 307 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 NSMAFQ92636 917 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 CREBZFQ9NS37 354 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GLOD5A6NK44 160 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GRXCR1A8MXD5 290 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 HSPA12AO43301 675 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 FBLP22087 321 aaKnown RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 AP2S1P53680 142 aaPredicted RBP18.35■□□□□ 0.53
COL27A1-207ENST00000494090 PIGFQ07326 219 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 SPIN3Q5JUX0 258 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 SGIP1Q9BQI5 828 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 SMURF1Q9HCE7 757 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 GPR34Q9UPC5 381 aa18.35■□□□□ 0.53
COL27A1-207ENST00000494090 STK19P49842 368 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-207ENST00000494090 SLC36A3Q495N2 470 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 OR52E8Q6IFG1 317 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 UNC5DQ6UXZ4 953 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 KDM1BQ8NB78 822 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 NINJ1Q92982 152 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 FUBP1Q96AE4 644 aaKnown RBP18.34■□□□□ 0.53
COL27A1-207ENST00000494090 HCN2Q9UL51 889 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 ALG5Q9Y673 324 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 TMEM14AQ9Y6G1 99 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 TRIM64A6NGJ6 449 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 AURKAO14965 403 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 FLRT2O43155 660 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 RHCEP18577 417 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 RIPPLY1Q0D2K3 151 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 DOC2AQ14183 400 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 RCAN2Q14206 197 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 PON2Q15165 354 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 OR5L2Q8NGL0 311 aa18.34■□□□□ 0.53
COL27A1-207ENST00000494090 ZNF431Q8TF32 576 aaPredicted RBP18.34■□□□□ 0.53
COL27A1-207ENST00000494090 PHOX2BQ99453 314 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms