RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 PDZK1IP1Q13113 114 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 NME3Q13232 169 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 RFTN2Q52LD8 501 aaPredicted RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 AGKQ53H12 422 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 C1orf189Q5VU69 101 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 LIPJQ5W064 366 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 ARSKQ6UWY0 536 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 Q6ZSR9 355 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 SELENOMQ8WWX9 145 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 PHYHIPQ92561 330 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 NAF1Q96HR8 494 aaKnown RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 MAGED4Q96JG8 741 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 INPP4AQ96PE3 977 aaPredicted RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 RAB40CQ96S21 281 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 MTHFD2LQ9H903 347 aaPredicted RBP5.31□□□□□ -1.56
SMC2-205ENST00000493955 GDF3Q9NR23 364 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 LNPEPQ9UIQ6 1025 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 PPP1R3CQ9UQK1 317 aa5.31□□□□□ -1.56
SMC2-205ENST00000493955 NCAPD2Q15021 1401 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 MYH15Q9Y2K3 1946 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 NCAPD3P42695 1498 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 ATAD2BQ9ULI0 1458 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 CLDN3O15551 220 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 KIAA0513O60268 411 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 CEACAM4O75871 244 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 IGHEP01854 428 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 RPLP0P05388 317 aaKnown RBP5.3□□□□□ -1.56
SMC2-205ENST00000493955 ZCCHC18P0CG32 403 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 GNB3P16520 340 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 TSFMP43897 325 aaKnown RBP5.3□□□□□ -1.56
SMC2-205ENST00000493955 BTG3Q14201 252 aaPredicted RBP5.3□□□□□ -1.56
SMC2-205ENST00000493955 AMZ2Q86W34 360 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 OR52B4Q8NGK2 314 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 TMEM190Q8WZ59 177 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 COQ10BQ9H8M1 238 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 ACTR8Q9H981 624 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 ICAM5Q9UMF0 924 aa5.3□□□□□ -1.56
SMC2-205ENST00000493955 HMGXB3Q12766 1538 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 IKBKBO14920 756 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 MAGEC1O60732 1142 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 PRDX2P32119 198 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 MAGEA4P43358 317 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 SNRPD1P62314 119 aaKnown RBP5.29□□□□□ -1.56
SMC2-205ENST00000493955 SGSM1Q2NKQ1 1148 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 LIPKQ5VXJ0 399 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 ZNF730Q6ZMV8 503 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 Q6ZRG5 221 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 CATSPERDQ86XM0 798 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 CNPY4Q8N129 248 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 CERS5Q8N5B7 392 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 ZNF540Q8NDQ6 660 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 OR9Q2Q8NGE9 314 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 LIPHQ8WWY8 451 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 P3H4Q92791 437 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 MRPL24Q96A35 216 aaKnown RBP5.29□□□□□ -1.56
SMC2-205ENST00000493955 THUMPD2Q9BTF0 503 aaKnown RBP5.29□□□□□ -1.56
SMC2-205ENST00000493955 PINK1Q9BXM7 581 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 CXXC4Q9H2H0 198 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 KLHL8Q9P2G9 620 aaPredicted RBP5.29□□□□□ -1.56
SMC2-205ENST00000493955 CGNQ9P2M7 1197 aaKnown RBP5.29□□□□□ -1.56
SMC2-205ENST00000493955 KLK11Q9UBX7 282 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 ERRFI1Q9UJM3 462 aaPredicted RBP5.29□□□□□ -1.56
SMC2-205ENST00000493955 MGAT4BQ9UQ53 548 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 KIF3AQ9Y496 699 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 ATG4BQ9Y4P1 393 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 CSNK1G3Q9Y6M4 447 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 ZHX2Q9Y6X8 837 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 SMARCA2P51531 1590 aa5.29□□□□□ -1.56
SMC2-205ENST00000493955 FGD5Q6ZNL6 1462 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 A0A087WZY1 265 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 EME2A4GXA9 379 aaPredicted RBP5.28□□□□□ -1.56
SMC2-205ENST00000493955 A8MU76 341 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 CSO75390 466 aaKnown RBP5.28□□□□□ -1.56
SMC2-205ENST00000493955 KRT6BP04259 564 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 EDNRAP25101 427 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 KRT6CP48668 564 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 ABCE1P61221 599 aaKnown RBP5.28□□□□□ -1.56
SMC2-205ENST00000493955 CDKL1Q00532 357 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 FUT7Q11130 342 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 MTF1Q14872 753 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 ZNF528Q3MIS6 628 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 ZNF876PQ49A33 203 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 RIPPLY2Q5TAB7 128 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 PWWP2BQ6NUJ5 590 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 MEX3BQ6ZN04 569 aaKnown RBP5.28□□□□□ -1.56
SMC2-205ENST00000493955 ZER1Q7Z7L7 766 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 ITIH5Q86UX2 942 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 BCORP1Q8N888 145 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 MRGPRDQ8TDS7 321 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 ATP8B4Q8TF62 1192 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 TCP11Q8WWU5 503 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 TRIM44Q96DX7 344 aaPredicted RBP5.28□□□□□ -1.56
SMC2-205ENST00000493955 GMPPAQ96IJ6 420 aaPredicted RBP5.28□□□□□ -1.56
SMC2-205ENST00000493955 COG3Q96JB2 828 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 DCTN5Q9BTE1 182 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 CLEC7AQ9BXN2 247 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 VAT1LQ9HCJ6 419 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 SDF2L1Q9HCN8 221 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 LHX3Q9UBR4 397 aa5.28□□□□□ -1.56
SMC2-205ENST00000493955 BCAP29Q9UHQ4 241 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms