RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PSMB5P28074 263 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 GRIA3P42263 894 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CASP3P42574 277 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 BDKRB1P46663 353 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SLC1A6P48664 564 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 IDH3AP50213 366 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ERFP50548 548 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 NUDT2P50583 147 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 GABARAPL2P60520 117 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 B2MP61769 119 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 OLR1P78380 273 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 MRPS15P82914 257 aaKnown RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ART3Q13508 389 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 GK3PQ14409 553 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 NCF4Q15080 339 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SPATS1Q496A3 300 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 NHSL2Q5HYW2 709 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CTSL3PQ5NE16 218 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 RBM48Q5RL73 367 aaKnown RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 FCRL6Q6DN72 434 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 AFTPHQ6ULP2 937 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 FRMD7Q6ZUT3 714 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 KCTD8Q6ZWB6 473 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CAND1Q86VP6 1230 aaKnown RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 TBC1D21Q8IYX1 336 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SLC22A15Q8IZD6 547 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 MPP5Q8N3R9 675 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ZNF655Q8N720 491 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 RBMXL3Q8N7X1 1067 aaKnown RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ANKRD53Q8N9V6 530 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 TEX19Q8NA77 164 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 FBXO36Q8NEA4 188 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 FDCSPQ8NFU4 85 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 OR6P1Q8NGX9 317 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 OR4L1Q8NH43 312 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 OR5K2Q8NHB8 316 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 PHF10Q8WUB8 498 aaKnown RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CPT1BQ92523 772 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 COL26A1Q96A83 441 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 PWWP2AQ96N64 755 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 PPP1R2P1Q96PQ5 205 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SLC25A23Q9BV35 468 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ADI1Q9BV57 179 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 NLNQ9BYT8 704 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 LIN7BQ9HAP6 207 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ZBTB20Q9HC78 741 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ATP13A2Q9NQ11 1180 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 TREX1Q9NSU2 369 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SACM1LQ9NTJ5 587 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 C20orf96Q9NUD7 363 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 STOX2Q9P2F5 926 aaPredicted RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 TSR3Q9UJK0 312 aaKnown RBP7.76□□□□□ -1.17
HDAC6-234ENST00000493923 SNX7Q9UNH6 387 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 GRIP1Q9Y3R0 1128 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CORINQ9Y5Q5 1042 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 NUP210LQ5VU65 1888 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 ZGRF1Q86YA3 2104 aa7.76□□□□□ -1.17
HDAC6-234ENST00000493923 CRYBG3Q68DQ2 2970 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 A0A0J9YY10 115 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MYOCOSA0A1B0GUC4 107 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 HEATR9A2RTY3 570 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 C7orf72A4D263 438 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 CENPXA8MT69 81 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ISM1B1AKI9 464 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 TRIM49D1C9J1S8 452 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 E7EQ34 232 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ARHGEF9O43307 516 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PRICKLE3O43900 615 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 CTSVO60911 334 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 TMCC2O75069 709 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 AVILO75366 819 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 SORBS2O94875 1100 aaKnown RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 TMEM63AO94886 807 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 FTH1P02794 183 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 KLK3P07288 261 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 APRTP07741 180 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 STMN1P16949 149 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 ZNF182P17025 639 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 DDX5P17844 614 aaKnown RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 NCF2P19878 526 aaPredicted RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MGAT1P26572 445 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PIK3R1P27986 724 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 AOAHP28039 575 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 GSTM2P28161 218 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 GABRB3P28472 473 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 EPHA3P29320 983 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 OTX2P32243 289 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 SHMT2P34897 504 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 OPRL1P41146 370 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 BLVRAP53004 296 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PPP5CP53041 499 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 RAD23AP54725 363 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 DSTNP60981 165 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 COPZ1P61923 177 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 SNRPNP63162 240 aaKnown RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 MERTKQ12866 999 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 PMS2P3Q13401 168 aa7.75□□□□□ -1.17
HDAC6-234ENST00000493923 FASTKD3Q14CZ7 662 aaKnown RBP7.75□□□□□ -1.17
HDAC6-234ENST00000493923 SLC5A12Q1EHB4 618 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms