RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 OVCH1Q7RTY7 1134 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 LAPTM4BQ86VI4 370 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 MIEF2Q96C03 454 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 CNRIP1Q96F85 164 aaPredicted RBP18.22■□□□□ 0.51
USP39-218ENST00000493829 OR1F2PQ96R84 312 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 SLC25A23Q9BV35 468 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 SLAMF7Q9NQ25 335 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 SLC35C2Q9NQQ7 365 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 EHD3Q9NZN3 535 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 MKL2Q9ULH7 1088 aa18.22■□□□□ 0.51
USP39-218ENST00000493829 EBAG9O00559 213 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 FBP2O00757 339 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 CLDN4O14493 209 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 NVLO15381 856 aaKnown RBP18.21■□□□□ 0.51
USP39-218ENST00000493829 CFLARO15519 480 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 BRINP1O60477 761 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 ABCB1P08183 1280 aaPredicted RBP18.21■□□□□ 0.51
USP39-218ENST00000493829 ZGLP1P0C6A0 271 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 CCNYL3P0C7X3 344 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 NTSP30990 170 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 EFNA3P52797 238 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 WNT3P56703 355 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 CAMK2BQ13554 666 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 NKG7Q16617 165 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 MMEL1Q495T6 779 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 REP15Q6BDI9 236 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 FAAH2Q6GMR7 532 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 C6orf89Q6UWU4 347 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 CAMKMTQ7Z624 323 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 ZNF595Q8IYB9 648 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 OR4K14Q8NGD5 310 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 DOK4Q8TEW6 326 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 TSLPQ969D9 159 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 ANKRD9Q96BM1 317 aaPredicted RBP18.21■□□□□ 0.51
USP39-218ENST00000493829 COQ8BQ96D53 544 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 CMTM5Q96DZ9 223 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 BBS4Q96RK4 519 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 DPH2Q9BQC3 489 aaPredicted RBP18.21■□□□□ 0.51
USP39-218ENST00000493829 BHLHE41Q9C0J9 482 aaPredicted RBP18.21■□□□□ 0.51
USP39-218ENST00000493829 ASCL3Q9NQ33 180 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 SLC52A3Q9NQ40 469 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 GIMAP4Q9NUV9 329 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 TAGLN3Q9UI15 199 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 ZNF780BQ9Y6R6 833 aa18.21■□□□□ 0.51
USP39-218ENST00000493829 AIM2O14862 343 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 PCSK2P16519 638 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 NCBP2P52298 156 aaKnown RBP eCLIP18.2■□□□□ 0.5
USP39-218ENST00000493829 STX4Q12846 297 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 HSPB3Q12988 150 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 KRT72Q14CN4 511 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 C6orf10Q5SRN2 563 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 RETREG3Q86VR2 466 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 OR8J2Q8NGG1 315 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 RP9Q8TA86 221 aaKnown RBP18.2■□□□□ 0.5
USP39-218ENST00000493829 CT55Q8WUE5 264 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 TANKQ92844 425 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 FKBP10Q96AY3 582 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 PTCHD1Q96NR3 888 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 INPP5KQ9BT40 448 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 SPRY4Q9C004 299 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 VN1R1Q9GZP7 353 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 IL1RL2Q9HB29 575 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 NECTIN3Q9NQS3 549 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 PSME2Q9UL46 239 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 PADI1Q9ULC6 663 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 NDUFAF1Q9Y375 327 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 PIEZO1Q92508 2521 aa18.2■□□□□ 0.5
USP39-218ENST00000493829 A0A1W2PP18 115 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 CDRT15L2A8MXV6 281 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 STMND1H3BQB6 276 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 MRASO14807 208 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 RAD1O60671 282 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 CPSF4O95639 269 aaKnown RBP18.19■□□□□ 0.5
USP39-218ENST00000493829 C6orf47O95873 294 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 PPP2R1BP30154 601 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 ID4P47928 161 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 XKP51811 444 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 NCF4Q15080 339 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 MAPKAPK3Q16644 382 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 PAGE3Q5JUK9 113 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 ZNF551Q7Z340 670 aaPredicted RBP18.19■□□□□ 0.5
USP39-218ENST00000493829 NLGN4XQ8N0W4 816 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 ENDOVQ8N8Q3 282 aaKnown RBP18.19■□□□□ 0.5
USP39-218ENST00000493829 NLGN4YQ8NFZ3 816 aaPredicted RBP18.19■□□□□ 0.5
USP39-218ENST00000493829 SCNM1Q9BWG6 230 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 C14orf105Q9NVL8 296 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 TMEM45AQ9NWC5 275 aa18.19■□□□□ 0.5
USP39-218ENST00000493829 FAM120CQ9NX05 1096 aaKnown RBP18.19■□□□□ 0.5
USP39-218ENST00000493829 IGLV3-12A0A075B6K2 115 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 A0A1W2PRB8 838 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 TBX19O60806 448 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 GPR75O95800 540 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 ESRRAP11474 423 aaPredicted RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 PRDX6P30041 224 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 NUDT2P50583 147 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 RHAGQ02094 409 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 LTB4RQ15722 352 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 MRPL14Q6P1L8 145 aaKnown RBP18.18■□□□□ 0.5
USP39-218ENST00000493829 SCUBE1Q8IWY4 988 aa18.18■□□□□ 0.5
USP39-218ENST00000493829 CCDC116Q8IYX3 515 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms