RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 ERVK-19Q9WJR5 959 aa3.16□□□□□ -1.9
ITGB1-216ENST00000493758 FAM168BA1KXE4 195 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 RNF212BA8MTL3 300 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 H0Y626 953 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 SLC33A1O00400 549 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-216ENST00000493758 KIAA0513O60268 411 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF253O75346 499 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 LYNP07948 512 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 OR9G9P0C7N8 305 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 TNFRSF4P43489 277 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 RPL27P61353 136 aaKnown RBP3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ST8SIA6P61647 398 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ROR1Q01973 937 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 SLC17A1Q14916 467 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 SPHARQ15513 63 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 FUT11Q495W5 492 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 HECTD3Q5T447 861 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 WDR25Q64LD2 544 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-216ENST00000493758 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 CD164L2Q6UWJ8 174 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF600Q6ZNG1 722 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 FAM47EQ6ZV65 393 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 HOOK3Q86VS8 718 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 C11orf53Q8IXP5 236 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 CARNMT1Q8N4J0 409 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 SAMD12Q8N8I0 201 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF491Q8N8L2 437 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 OR1K1Q8NGR3 316 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 GGHQ92820 318 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 PNPLA2Q96AD5 504 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ULK4Q96C45 1275 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 PANX3Q96QZ0 392 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 RANBP9Q96S59 729 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ACPTQ9BZG2 426 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 CUEDC2Q9H467 287 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 DPEP3Q9H4B8 488 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ZWILCHQ9H900 591 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 VSIG4Q9Y279 399 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 FBXO7Q9Y3I1 522 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 ACEP12821 1306 aa3.15□□□□□ -1.91
ITGB1-216ENST00000493758 C13orf42A0A1B0GVH6 325 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 TMEM129A0AVI4 362 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF487B1APH4 448 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 OR6A2O95222 327 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 SLU7O95391 586 aaKnown RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 TCF7P36402 384 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 MAGEB1P43366 347 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 TNFSF10P50591 281 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 SNU13P55769 128 aaKnown RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 TRA2BP62995 288 aaKnown RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 LCP2Q13094 533 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 KBTBD12Q3ZCT8 623 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 GBP6Q6ZN66 633 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 TUSC5Q8IXB3 177 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 ZBED8Q8IZ13 594 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 CD177Q8N6Q3 437 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 FIBINQ8TAL6 211 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 CNOT6LQ96LI5 555 aaKnown RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 GUCD1Q96NT3 240 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 SPAG8Q99932 426 aaPredicted RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 UTP14AQ9BVJ6 771 aaKnown RBP3.14□□□□□ -1.91
ITGB1-216ENST00000493758 WWP1Q9H0M0 922 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 RNPEPL1Q9HAU8 725 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 ZNF446Q9NWS9 450 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 SEPT10Q9P0V9 454 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 TEKT2Q9UIF3 430 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 KCNK6Q9Y257 313 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 OR1A2Q9Y585 309 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 ATRXP46100 2492 aa3.14□□□□□ -1.91
ITGB1-216ENST00000493758 MCF2LO15068 1137 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 TTI1O43156 1089 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 HSP90AB1P08238 724 aaKnown RBP3.13□□□□□ -1.91
ITGB1-216ENST00000493758 GSTA2P09210 222 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 MMP10P09238 476 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 GIG44P09565 113 aaPredicted RBP3.13□□□□□ -1.91
ITGB1-216ENST00000493758 GPX3P22352 226 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 SLC12A3P55017 1021 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 POU5F1Q01860 360 aaKnown RBP3.13□□□□□ -1.91
ITGB1-216ENST00000493758 TIMM50Q3ZCQ8 353 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 RHBDD2Q6NTF9 364 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 ITIH5Q86UX2 942 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 LAX1Q8IWV1 398 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 CLYBLQ8N0X4 340 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 CCDC197Q8NCU1 140 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 TRPV3Q8NET8 790 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 MRPL24Q96A35 216 aaKnown RBP3.13□□□□□ -1.91
ITGB1-216ENST00000493758 CAPNS2Q96L46 248 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 C19orf43Q9BQ61 176 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 TTYH2Q9BSA4 534 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 ST6GALNAC5Q9BVH7 336 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 NAPBQ9H115 298 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 ABCC13Q9NSE7 274 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 CUTCQ9NTM9 273 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 ANAPC11Q9NYG5 84 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 MLXQ9UH92 298 aa3.13□□□□□ -1.91
ITGB1-216ENST00000493758 IGHV3OR16-12A0A075B7B8 117 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 NEDD8-MDP1E9PL57 170 aa3.12□□□□□ -1.91
ITGB1-216ENST00000493758 CSO75390 466 aaKnown RBP3.12□□□□□ -1.91
ITGB1-216ENST00000493758 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
ITGB1-216ENST00000493758 PIGRP01833 764 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms