RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 GAL3ST3Q96A11 431 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
NECAB3-214ENST00000493590 INTS12Q96CB8 462 aaKnown RBP15.19■□□□□ 0.02
NECAB3-214ENST00000493590 WDYHV1Q96HA8 205 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 WFIKKN1Q96NZ8 548 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 SFXN3Q9BWM7 321 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 NPLQ9BXD5 320 aaPredicted RBP15.19■□□□□ 0.02
NECAB3-214ENST00000493590 UGT2B28Q9BY64 529 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 CALHM2Q9HA72 323 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 ZNF226Q9NYT6 803 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 CNIH4Q9P003 139 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 VTI1BQ9UEU0 232 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 CHCHD2Q9Y6H1 151 aaPredicted RBP15.19■□□□□ 0.02
NECAB3-214ENST00000493590 HEATR5AQ86XA9 2040 aa15.19■□□□□ 0.02
NECAB3-214ENST00000493590 EIF3FO00303 357 aaPredicted RBP15.18■□□□□ 0.02
NECAB3-214ENST00000493590 CTNSO60931 367 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 FTCDO95954 541 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 C1QAP02745 245 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 HNRNPH1P31943 449 aaKnown RBP15.18■□□□□ 0.02
NECAB3-214ENST00000493590 MSH2P43246 934 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 SLCO1A2P46721 670 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 PLA2G16P53816 162 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 DHX34Q14147 1143 aaKnown RBP15.18■□□□□ 0.02
NECAB3-214ENST00000493590 VASNQ6EMK4 673 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 C9orf40Q8IXQ3 194 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 KLHDC8AQ8IYD2 350 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 MEIOBQ8N635 442 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 ZNF721Q8TF20 911 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 LINGO1Q96FE5 620 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 CALR3Q96L12 384 aaKnown RBP15.18■□□□□ 0.02
NECAB3-214ENST00000493590 HS3ST6Q96QI5 342 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 GAL3ST4Q96RP7 486 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 NDNQ99608 321 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 MED18Q9BUE0 208 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 PELI2Q9HAT8 420 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 CNOT11Q9UKZ1 510 aaKnown RBP15.18■□□□□ 0.02
NECAB3-214ENST00000493590 WIF1Q9Y5W5 379 aa15.18■□□□□ 0.02
NECAB3-214ENST00000493590 RAI1Q7Z5J4 1906 aaPredicted RBP15.17■□□□□ 0.02
NECAB3-214ENST00000493590 WIPF1O43516 503 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 CYP4B1P13584 511 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 CERS1P27544 350 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 SOX18P35713 384 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 DIO3P55073 304 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 LIM2P55344 173 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 ATP5J2P56134 94 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 VEZF1Q14119 521 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 EIPR1Q53HC9 387 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 WIPI1Q5MNZ9 446 aaPredicted RBP15.17■□□□□ 0.02
NECAB3-214ENST00000493590 LYPD8Q6UX82 237 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 PLEKHM3Q6ZWE6 761 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 HIPK1Q86Z02 1210 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 TMEM171Q8WVE6 324 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 DIO2Q92813 273 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 ABTB1Q969K4 478 aaPredicted RBP15.17■□□□□ 0.02
NECAB3-214ENST00000493590 MS4A6EQ96DS6 147 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 ZC3HAV1LQ96H79 300 aaKnown RBP15.17■□□□□ 0.02
NECAB3-214ENST00000493590 TSGA10Q9BZW7 698 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 COPS7BQ9H9Q2 264 aaPredicted RBP15.17■□□□□ 0.02
NECAB3-214ENST00000493590 COMMD10Q9Y6G5 202 aa15.17■□□□□ 0.02
NECAB3-214ENST00000493590 A0A088AWK7 358 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 SYNDIG1LA6NDD5 238 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 BTNL10A8MVZ5 291 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 CYR61O00622 381 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 TRIM3O75382 744 aaPredicted RBP15.16■□□□□ 0.02
NECAB3-214ENST00000493590 HAUS5O94927 633 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 ZNF10P21506 573 aaPredicted RBP15.16■□□□□ 0.02
NECAB3-214ENST00000493590 MC3RP41968 323 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 RPL21P46778 160 aaKnown RBP15.16■□□□□ 0.02
NECAB3-214ENST00000493590 MASP1P48740 699 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 CDK9P50750 372 aaKnown RBP15.16■□□□□ 0.02
NECAB3-214ENST00000493590 SRYQ05066 204 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 FAM27E3Q08E93 113 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 CAPRIN1Q14444 709 aaKnown RBP15.16■□□□□ 0.02
NECAB3-214ENST00000493590 CHRFAM7AQ494W8 412 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 BICRALQ6AI39 1079 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 UGT3A1Q6NUS8 523 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 PAQR3Q6TCH7 311 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 NXPE4Q6UWF7 544 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 NUBPLQ8TB37 319 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 DOK4Q8TEW6 326 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 GNRHR2Q96P88 292 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 FAM111AQ96PZ2 611 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 PIGMQ9H3S5 423 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 MAD1L1Q9Y6D9 718 aa15.16■□□□□ 0.02
NECAB3-214ENST00000493590 USF3Q68DE3 2245 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 TCRBV7S3A2A0A539 114 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 MIF4GDA9UHW6 222 aaKnown RBP15.15■□□□□ 0.02
NECAB3-214ENST00000493590 H0Y3Z8 333 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 SMNDC1O75940 238 aaKnown RBP eCLIP15.15■□□□□ 0.024e-6■■□□□ 12.4
NECAB3-214ENST00000493590 HPNP05981 417 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 FBXO45P0C2W1 286 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 COX7A2P14406 83 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 CRYGSP22914 178 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 SERPINB3P29508 390 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 SERTAD2Q14140 314 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 EFTUD2Q15029 972 aaKnown RBP eCLIP15.15■□□□□ 0.021e-8■■■■■ 30.5
NECAB3-214ENST00000493590 THOC6Q86W42 341 aaKnown RBP15.15■□□□□ 0.02
NECAB3-214ENST00000493590 CCDC170Q8IYT3 715 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 ATL1Q8WXF7 558 aa15.15■□□□□ 0.02
NECAB3-214ENST00000493590 FBXL8Q96CD0 374 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms