RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 OR52E8Q6IFG1 317 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 RNF165Q6ZSG1 346 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 Q6ZSR9 355 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 TRIM42Q8IWZ5 723 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 TMEM132CQ8N3T6 1108 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 SIRT6Q8N6T7 355 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 TM9SF4Q92544 642 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 EBPLQ9BY08 206 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 MMP25Q9NPA2 562 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 C1orf109Q9NX04 203 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 C5AR2Q9P296 337 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PSME2Q9UL46 239 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 DLGAP4Q9Y2H0 992 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 RAP2CQ9Y3L5 183 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 CCL27Q9Y4X3 112 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 POLR3HQ9Y535 204 aaPredicted RBP13.07□□□□□ -0.32
CCM2-217ENST00000492883 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
CCM2-217ENST00000492883 PCSK5Q92824 1860 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 DYRK3O43781 588 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 OR10H2O60403 315 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 SKAP2O75563 359 aaPredicted RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 COX7A2P14406 83 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 ALOX15P16050 662 aaPredicted RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 RPL14P50914 215 aaKnown RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 TAS2R50P59544 299 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 PLIN5Q00G26 463 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 BST1Q10588 318 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 CRB2Q5IJ48 1285 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 ATG16L1Q676U5 607 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 ISLR2Q6UXK2 745 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 LINC00696Q6ZRV3 163 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 KIRREL3Q8IZU9 778 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 ZNF781Q8N8C0 355 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 TEX19Q8NA77 164 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 NFAM1Q8NET5 270 aaPredicted RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 B3GNT7Q8NFL0 401 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 OR4K14Q8NGD5 310 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 CDC26Q8NHZ8 85 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 DNAJB14Q8TBM8 379 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 C16orf78Q8WTQ4 265 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 PSMF1Q92530 271 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 PPWD1Q96BP3 646 aaKnown RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 METTL2AQ96IZ6 378 aaKnown RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 CCT7Q99832 543 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 C20orf27Q9GZN8 174 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 MANSC1Q9H8J5 431 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 SIRT5Q9NXA8 310 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 TEKT2Q9UIF3 430 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 ANKRD11Q6UB99 2663 aaPredicted RBP13.06□□□□□ -0.32
CCM2-217ENST00000492883 FER1L5A0AVI2 2057 aa13.06□□□□□ -0.32
CCM2-217ENST00000492883 SEC16AO15027 2179 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 PKD1L2Q7Z442 2459 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 SCN3AQ9NY46 2000 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 C17orf105B2RV13 164 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 DPM1O60762 260 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 IL3P08700 152 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 DRD2P14416 443 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 PRPH2P23942 346 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 GSTM5P46439 218 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 STT3AP46977 705 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 CLCN2P51788 898 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 XKP51811 444 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 IGLV3-21P80748 117 aaPredicted RBP13.05□□□□□ -0.32
CCM2-217ENST00000492883 C2orf80Q0P641 193 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 HEPACAMQ14CZ8 416 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 TERF2Q15554 542 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 GALNTL6Q49A17 601 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 ABHD17BQ5VST6 288 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 B3GNTL1Q67FW5 361 aaPredicted RBP13.05□□□□□ -0.32
CCM2-217ENST00000492883 NOXRED1Q6NXP6 359 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 HPS6Q86YV9 775 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 MMP21Q8N119 569 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 KIF2BQ8N4N8 673 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 ZADH2Q8N4Q0 377 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 MORN4Q8NDC4 146 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 OR2T11Q8NH01 316 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 OR14A16Q8NHC5 309 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 PTPMT1Q8WUK0 201 aaPredicted RBP13.05□□□□□ -0.32
CCM2-217ENST00000492883 C11orf24Q96F05 449 aaPredicted RBP13.05□□□□□ -0.32
CCM2-217ENST00000492883 PPP3R2Q96LZ3 170 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 LMF1Q96S06 567 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 PELOQ9BRX2 385 aaKnown RBP13.05□□□□□ -0.32
CCM2-217ENST00000492883 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 EPS8L2Q9H6S3 715 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 ZBTB20Q9HC78 741 aaPredicted RBP13.05□□□□□ -0.32
CCM2-217ENST00000492883 THAP1Q9NVV9 213 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 STMN3Q9NZ72 180 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 EPG5Q9HCE0 2579 aa13.05□□□□□ -0.32
CCM2-217ENST00000492883 ZFHX4Q86UP3 3567 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 ATP6AP2A0A1C7CYW4 349 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 NPIPB8E9PQR5 432 aa13.04□□□□□ -0.32
CCM2-217ENST00000492883 LSM1O15116 133 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms