RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 SEM1Q6ZVN7 128 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 CNTN4Q8IWV2 1026 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 OR2L5Q8NG80 312 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 NEIL3Q8TAT5 605 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 SLC22A8Q8TCC7 542 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 CFAP36Q96G28 342 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 QRFPRQ96P65 431 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 SERINC2Q96SA4 455 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 EGFL8Q99944 293 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 NAT9Q9BTE0 207 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 SLC6A15Q9H2J7 730 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 QPCTLQ9NXS2 382 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 VTI1BQ9UEU0 232 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 CHMP2BQ9UQN3 213 aa13.33□□□□□ -0.28
SSR4-212ENST00000491833 ESYT3A0FGR9 886 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 LRIT2A6NDA9 550 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 CYR61O00622 381 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 CTNSO60931 367 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 H2AFYO75367 372 aaKnown RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 AHSGP02765 367 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 RHOXF2BP0C7M4 288 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 EPXP11678 715 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 GNAZP19086 355 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 MTTPP55157 894 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 PDIA2Q13087 525 aaKnown RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 SERTAD2Q14140 314 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 ACSF3Q4G176 576 aaPredicted RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 PRAMEF20Q5VT98 475 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 SLC22A10Q63ZE4 541 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 FAM45BPQ6NSW5 357 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 GALNT7Q86SF2 657 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 KIF18BQ86Y91 864 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 LACC1Q8IV20 430 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 KRT78Q8N1N4 520 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 TNIP2Q8NFZ5 429 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 FAM45AQ8TCE6 357 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 PAQR8Q8TEZ7 354 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 NUDT8Q8WV74 236 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 IFT81Q8WYA0 676 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 RHOXF2Q9BQY4 288 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 REXO4Q9GZR2 422 aaKnown RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 L2HGDHQ9H9P8 463 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 ZFP64Q9NPA5 681 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 ZNF629Q9UEG4 869 aaPredicted RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 IKZF3Q9UKT9 509 aa13.32□□□□□ -0.28
SSR4-212ENST00000491833 CORO1CQ9ULV4 474 aaPredicted RBP13.32□□□□□ -0.28
SSR4-212ENST00000491833 C15orf38-AP3S2A0A0A6YYH1 394 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ANKDD1BA6NHY2 528 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 LRRC3CA6NJW4 275 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 CLCA1A8K7I4 914 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 LDB3O75112 727 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 CLEC3AO75596 197 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 WDR47O94967 919 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
SSR4-212ENST00000491833 TTC4O95801 387 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 IL2RAP01589 272 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 RFPL3SP0C7P2 107 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 C1GALT1C1LP0DN25 315 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 COX7A2P14406 83 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 CEACAM8P31997 349 aaPredicted RBP13.31□□□□□ -0.28
SSR4-212ENST00000491833 TIMP3P35625 211 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 PGGT1BP53609 377 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 CDKL1Q00532 357 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 SORDQ00796 357 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ASPHQ12797 758 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 MPEG1Q2M385 716 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ADPRMQ3LIE5 342 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 SHEQ5VZ18 495 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 KRTAP1-3Q8IUG1 177 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 IFT20Q8IY31 132 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ZBED8Q8IZ13 594 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 NUBPLQ8TB37 319 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 KIAA1191Q96A73 305 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 LRRC39Q96DD0 335 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ARSGQ96EG1 525 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 HSPBAP1Q96EW2 488 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 YIPF4Q9BSR8 244 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ZNF395Q9H8N7 513 aaPredicted RBP13.31□□□□□ -0.28
SSR4-212ENST00000491833 PLEKHF2Q9H8W4 249 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 SH2D2AQ9NP31 389 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 SAYSD1Q9NPB0 183 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 ACKR4Q9NPB9 350 aa13.31□□□□□ -0.28
SSR4-212ENST00000491833 NSD1Q96L73 2696 aaPredicted RBP13.31□□□□□ -0.28
SSR4-212ENST00000491833 MAP1AP78559 2803 aaPredicted RBP13.31□□□□□ -0.28
SSR4-212ENST00000491833 NPEPPSL1A6NEC2 478 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 AHRRA9YTQ3 701 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 BANF1O75531 89 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 EPPINO95925 133 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 ZNF37AP17032 561 aaPredicted RBP13.3□□□□□ -0.28
SSR4-212ENST00000491833 IVDP26440 423 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 TRPC1P48995 793 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 HNMTP50135 292 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 WNT3P56703 355 aa13.3□□□□□ -0.28
SSR4-212ENST00000491833 NKX6-1P78426 367 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms