RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CCT6BQ92526 530 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 F2RL3Q96RI0 385 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 SERINC2Q96SA4 455 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 TRIM54Q9BYV2 358 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 EPB41L4BQ9H329 900 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 JKAMPQ9P055 326 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 CNOT11Q9UKZ1 510 aaKnown RBP12.15□□□□□ -0.46
USF1-206ENST00000491629 EDARQ9UNE0 448 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 MRPS33Q9Y291 106 aaKnown RBP12.15□□□□□ -0.46
USF1-206ENST00000491629 VWA7Q9Y334 891 aa12.15□□□□□ -0.46
USF1-206ENST00000491629 TUBAL3A6NHL2 446 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 CLEC3AO75596 197 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 CD22P20273 847 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 MTTPP55157 894 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 NKX6-1P78426 367 aaPredicted RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 IGLV3-21P80748 117 aaPredicted RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 STX4Q12846 297 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 DUSP8Q13202 625 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 ZNF460Q14592 562 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 DCST1Q5T197 706 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 RNASEH2BQ5TBB1 312 aaKnown RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 VWA5B2Q8N398 1253 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 OR10G3Q8NGC4 313 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 NUBPLQ8TB37 319 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 SPACA9Q96E40 222 aaPredicted RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 TIMP4Q99727 224 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 REXO4Q9GZR2 422 aaKnown RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 NT5DC2Q9H857 520 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 HOMER3Q9NSC5 361 aa12.14□□□□□ -0.47
USF1-206ENST00000491629 ZNF629Q9UEG4 869 aaPredicted RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 CHD3Q12873 2000 aaKnown RBP12.14□□□□□ -0.47
USF1-206ENST00000491629 PRR14LQ5THK1 2151 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 CLCA1A8K7I4 914 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 AHRRA9YTQ3 701 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 RTCAO00442 366 aaKnown RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 TAPBPO15533 448 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 FGF17O60258 216 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 TRIM3O75382 744 aaPredicted RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 WDR47O94967 919 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 ZNF37AP17032 561 aaPredicted RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 GNAZP19086 355 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 TNNI3P19429 210 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 SOX18P35713 384 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 KCNJ2P63252 427 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 CDKL1Q00532 357 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 EFTUD2Q15029 972 aaKnown RBP eCLIP12.13□□□□□ -0.473e-7■■■■□ 19.6
USF1-206ENST00000491629 POU4F3Q15319 338 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 FBXO48Q5FWF7 155 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 FNDC7Q5VTL7 733 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 BICRALQ6AI39 1079 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 TRMT10BQ6PF06 316 aaKnown RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 TAOK1Q7L7X3 1001 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 MAATS1Q7Z4T9 603 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 OR5L2Q8NGL0 311 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 ANKRD49Q8WVL7 239 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 PPWD1Q96BP3 646 aaKnown RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 RHBDF1Q96CC6 855 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 CERS2Q96G23 380 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 SENP5Q96HI0 755 aaPredicted RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 MS4A14Q96JA4 679 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 COX4I2Q96KJ9 171 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 RUNDC3BQ96NL0 473 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 TMEM79Q9BSE2 394 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 PRDM14Q9GZV8 571 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 NEUROD4Q9HD90 331 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 QPCTLQ9NXS2 382 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 MTRF1LQ9UGC7 380 aaKnown RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 FOXD3Q9UJU5 478 aaPredicted RBP12.13□□□□□ -0.47
USF1-206ENST00000491629 ADAM21Q9UKJ8 722 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 PSAT1Q9Y617 370 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 PCNX3Q9H6A9 2034 aa12.13□□□□□ -0.47
USF1-206ENST00000491629 PABPN1LA6NDY0 278 aaKnown RBP12.12□□□□□ -0.47
USF1-206ENST00000491629 C1QAP02745 245 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 CLPSP04118 112 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 ATP5A1P25705 553 aaKnown RBP12.12□□□□□ -0.47
USF1-206ENST00000491629 PCBP2Q15366 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
USF1-206ENST00000491629 TSNQ15631 228 aaKnown RBP12.12□□□□□ -0.47
USF1-206ENST00000491629 CYP1B1Q16678 543 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 NSUN5P2Q63ZY6 315 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 FAM45BPQ6NSW5 357 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 TRIM40Q6P9F5 258 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 LACC1Q8IV20 430 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 PPIL6Q8IXY8 311 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 SPC24Q8NBT2 197 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 TTLQ8NG68 377 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 FAM45AQ8TCE6 357 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 ESAMQ96AP7 390 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 UBQLN3Q9H347 655 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 GRPEL1Q9HAV7 217 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 LZTFL1Q9NQ48 299 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 BEX4Q9NWD9 120 aaPredicted RBP12.12□□□□□ -0.47
USF1-206ENST00000491629 BOKQ9UMX3 212 aaPredicted RBP12.12□□□□□ -0.47
USF1-206ENST00000491629 SLC6A5Q9Y345 797 aa12.12□□□□□ -0.47
USF1-206ENST00000491629 OARD1Q9Y530 152 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms