RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 ASB4Q9Y574 426 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 TEX15Q9BXT5 2789 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 NOTCH2Q04721 2471 aa16.7■□□□□ 0.26
HMGN1-219ENST00000491183 A0A0A6YYD5 115 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 PINLYPA6NC86 204 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 A8MVJ9 347 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 TRIM49D1C9J1S8 452 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 HRKO00198 91 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 FOXE1O00358 373 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 HS6ST1O60243 411 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 CLDN9O95484 217 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 ESRRAP11474 423 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 STT3AP46977 705 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 NR0B1P51843 470 aaKnown RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 FOLH1Q04609 750 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 ZNF750Q32MQ0 723 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 RPTNQ6XPR3 784 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 NCCRP1Q6ZVX7 275 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 DOLPP1Q86YN1 238 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 GPALPP1Q8IXQ4 340 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 PSD4Q8NDX1 1056 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 ASB15Q8WXK1 588 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 TANKQ92844 425 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 REPS1Q96D71 796 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 MTFMTQ96DP5 389 aaKnown RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 SENP5Q96HI0 755 aaPredicted RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 SCYL1Q96KG9 808 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 NSUN5Q96P11 429 aaKnown RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 DGAT2Q96PD7 388 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 PHF12Q96QT6 1004 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 CENPKQ9BS16 269 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 DDX31Q9H8H2 851 aaKnown RBP16.69■□□□□ 0.26
HMGN1-219ENST00000491183 HPF1Q9NWY4 346 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 XPR1Q9UBH6 696 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 PHF11Q9UIL8 331 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 ZNF180Q9UJW8 692 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 MEMO1Q9Y316 297 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 IKBKGQ9Y6K9 419 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 ITPR2Q14571 2701 aa16.69■□□□□ 0.26
HMGN1-219ENST00000491183 A0A1W2PR48 441 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 ARHGAP10A1A4S6 786 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 STX16-NPEPL1H3BU86 382 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 STX16O14662 325 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 TFECO14948 347 aaPredicted RBP16.68■□□□□ 0.26
HMGN1-219ENST00000491183 KRT38O76015 456 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 TUBB4AP04350 444 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 IGKV3-11P04433 115 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 SBK3P0C264 359 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 COL6A2P12110 1019 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 ABOP16442 354 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 PHEXP78562 749 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 CDSNQ15517 529 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 CMPK2Q5EBM0 449 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 TMEM151AQ8N4L1 468 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 C7orf57Q8NEG2 295 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 OR52N2Q8NGI0 321 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 OR5L2Q8NGL0 311 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 DOK4Q8TEW6 326 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 NTMT1Q9BV86 223 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 PCTPQ9UKL6 214 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 TMCO1Q9UM00 188 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 KLF2Q9Y5W3 355 aaPredicted RBP16.68■□□□□ 0.26
HMGN1-219ENST00000491183 CENPEQ02224 2701 aa16.68■□□□□ 0.26
HMGN1-219ENST00000491183 A0A087WUV0 522 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-219ENST00000491183 A0A0G2JMM0 328 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 A0A1B0GTH9 108 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 A0A1W2PPB8 328 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 A0A1W2PRS3 328 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 GLOD5A6NK44 160 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 KIR3DP1A8MWS1 328 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 ADAM10O14672 748 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 GBAP04062 536 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 FAM58BPP0C7Q3 252 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 PRF1P14222 555 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 CNTFP26441 200 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 GCAP28676 217 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 TLX1P31314 330 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-219ENST00000491183 TRAF3Q13114 568 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 BIKQ13323 160 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 TSNAXIP1Q2TAA8 658 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 XKRXQ6PP77 449 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 C3P1Q6ZMU1 363 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 BNC2Q6ZN30 1099 aaPredicted RBP16.67■□□□□ 0.26
HMGN1-219ENST00000491183 RPS27LQ71UM5 84 aaKnown RBP16.67■□□□□ 0.26
HMGN1-219ENST00000491183 TAOK1Q7L7X3 1001 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 OR2M7Q8NG81 312 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 AGAP11Q8TF27 550 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 ATP6V1E2Q96A05 226 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 RBM18Q96H35 190 aaKnown RBP16.67■□□□□ 0.26
HMGN1-219ENST00000491183 PLSCR2Q9NRY7 297 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 LYARQ9NX58 379 aaKnown RBP16.67■□□□□ 0.26
HMGN1-219ENST00000491183 COPS7AQ9UBW8 275 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 PPT2Q9UMR5 302 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 NFU1Q9UMS0 254 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 HRH3Q9Y5N1 445 aa16.67■□□□□ 0.26
HMGN1-219ENST00000491183 A0A1B0GTL3 188 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 PPP6CO00743 305 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 HNRNPRO43390 633 aaKnown RBP16.66■□□□□ 0.26
HMGN1-219ENST00000491183 SMIM24O75264 130 aa16.66■□□□□ 0.26
HMGN1-219ENST00000491183 GPR75O95800 540 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms