RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CES3Q6UWW8 571 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 SH2D5Q6ZV89 423 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 IL17RELQ6ZVW7 336 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 ADGRE4PQ86SQ3 457 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 SDCCAG8Q86SQ7 713 aaPredicted RBP12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 CAND1Q86VP6 1230 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 C9orf40Q8IXQ3 194 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 ZNF595Q8IYB9 648 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 WNT2BQ93097 391 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 TRMT61AQ96FX7 289 aaKnown RBP12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 QRFPRQ96P65 431 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 CSF3RQ99062 836 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 CHP1Q99653 195 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 OPN3Q9H1Y3 402 aaPredicted RBP12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 ACBD3Q9H3P7 528 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 PDE10AQ9Y233 779 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 MED16Q9Y2X0 877 aa12.44□□□□□ -0.42
EXOSC3-207ENST00000490516 EXPH5Q8NEV8 1989 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 LRRC14BA6NHZ5 514 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 H0Y3Z8 333 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 NDUFS7O75251 213 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 ZNF189O75820 626 aaPredicted RBP12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 TJP3O95049 919 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 IGHV4-39P01824 125 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 FBXO45P0C2W1 286 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 POU2F1P14859 743 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 SRD5A1P18405 259 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 SAT1P21673 171 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 CCND1P24385 295 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 PTPN7P35236 360 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 PCYT1AP49585 367 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 GAB1Q13480 694 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 TMEM249Q2WGJ8 235 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 TBC1D19Q8N5T2 526 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 NUBPLQ8TB37 319 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 DIO2Q92813 273 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 STARD4Q96DR4 205 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 IQCDQ96DY2 449 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 SNF8Q96H20 258 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 OR4K3Q96R72 315 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 BPIFA3Q9BQP9 254 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 HAUS8Q9BT25 410 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 G6PC3Q9BUM1 346 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 NAT10Q9H0A0 1025 aaKnown RBP12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 CLCF1Q9UBD9 225 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 COPS7AQ9UBW8 275 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 MRPS33Q9Y291 106 aaKnown RBP12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 C15orf41Q9Y2V0 281 aa12.43□□□□□ -0.42
EXOSC3-207ENST00000490516 A0A096LNT2 108 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 E7EVH7 732 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 C16orf97H3BN30 126 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 CYR61O00622 381 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 CTNSO60931 367 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 THBDP07204 575 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 ENO3P13929 434 aaPredicted RBP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 CPN1P15169 458 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 HADHBP55084 474 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 MTTPP55157 894 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 CASP9P55211 416 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 SESN2P58004 480 aaPredicted RBP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 ID2Q02363 134 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 STX4Q12846 297 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 PDLIM3Q53GG5 364 aaPredicted RBP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 BEX5Q5H9J7 111 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 C12orf54Q6X4T0 127 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 CENPUQ71F23 418 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 YRDCQ86U90 279 aaKnown RBP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 CPNE9Q8IYJ1 553 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 SLC15A4Q8N697 577 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 TRPV3Q8NET8 790 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 ATL1Q8WXF7 558 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 AKAP1Q92667 903 aaKnown RBP eCLIP12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 MFSD3Q96ES6 412 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 PGM2Q96G03 612 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 FAR2Q96K12 515 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 RILPQ96NA2 401 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 UCN2Q96RP3 112 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 LMBRD1Q9NUN5 540 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 MAPRE3Q9UPY8 281 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 DTX4Q9Y2E6 619 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 IKBKGQ9Y6K9 419 aa12.42□□□□□ -0.42
EXOSC3-207ENST00000490516 ANKRD33BA6NCL7 494 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 PFDN6O15212 129 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 LDB3O75112 727 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 ACTL6AO96019 429 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 PGRP06401 933 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 SERPINA6P08185 405 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 SOD3P08294 240 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 SERPINB3P29508 390 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 MSH2P43246 934 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 KCNJ5P48544 419 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 MASP1P48740 699 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 EEF1A1P68104 462 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 RBBP5Q15291 538 aaKnown RBP12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 EEF1A1P5Q5VTE0 462 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 TMEM64Q6YI46 380 aa12.41□□□□□ -0.42
EXOSC3-207ENST00000490516 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms