RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 CDC40O60508 579 aaKnown RBP eCLIP9.61□□□□□ -0.87
RBM39-236ENST00000490484 SMIM24O75264 130 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 CLDN9O95484 217 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 GBAP04062 536 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 RBP1P09455 135 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 NR2F6P10588 404 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 CNTFP26441 200 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 BUD31P41223 144 aaPredicted RBP9.61□□□□□ -0.87
RBM39-236ENST00000490484 STT3AP46977 705 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 CCNG1P51959 295 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 RNF4P78317 190 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 IGLV3-21P80748 117 aaPredicted RBP9.61□□□□□ -0.87
RBM39-236ENST00000490484 ADORA2A-AS1P86434 159 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 TRAF3Q13114 568 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 TSNAXIP1Q2TAA8 658 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 MTFR2Q6P444 385 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 CYP20A1Q6UW02 462 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 IL20RBQ6UXL0 311 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 RPTNQ6XPR3 784 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 DGAT2L6Q6ZPD8 337 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 NCCRP1Q6ZVX7 275 aaPredicted RBP9.61□□□□□ -0.87
RBM39-236ENST00000490484 NUDT13Q86X67 352 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 SPPL2CQ8IUH8 684 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 GPALPP1Q8IXQ4 340 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 ZNF808Q8N4W9 903 aaPredicted RBP9.61□□□□□ -0.87
RBM39-236ENST00000490484 L3MBTL4Q8NA19 623 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 POGLUT1Q8NBL1 392 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 WDR20Q8TBZ3 569 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 DOK4Q8TEW6 326 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 ZNF721Q8TF20 911 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 PPWD1Q96BP3 646 aaKnown RBP9.61□□□□□ -0.87
RBM39-236ENST00000490484 CNPPD1Q9BV87 410 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 SEMA4BQ9NPR2 832 aaPredicted RBP9.61□□□□□ -0.87
RBM39-236ENST00000490484 DEPPQ9NTK1 212 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 ZNF180Q9UJW8 692 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 PCTPQ9UKL6 214 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 TMCO1Q9UM00 188 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 NFU1Q9UMS0 254 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 ZNF835Q9Y2P0 537 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
RBM39-236ENST00000490484 PINLYPA6NC86 204 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 HRKO00198 91 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 DYRK3O43781 588 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 OR10H2O60403 315 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 AIFM1O95831 613 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 RPS17P08708 135 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 ALOX15P16050 662 aaPredicted RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 TSPAN8P19075 237 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 PTX3P26022 381 aaPredicted RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 GRNP28799 593 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 TLX1P31314 330 aaPredicted RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 BSGP35613 385 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 ARFIP1P53367 373 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 PLGLB1Q02325 96 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 CUL3Q13618 768 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 FAM219BQ5XKK7 198 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 TTC19Q6DKK2 380 aaPredicted RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 METTL2BQ6P1Q9 378 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 C3P1Q6ZMU1 363 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 Q6ZPB1 254 aaPredicted RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 RPS27LQ71UM5 84 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 FGD2Q7Z6J4 655 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 CHERPQ8IWX8 916 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 C9orf40Q8IXQ3 194 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 ZFP62Q8NB50 900 aaPredicted RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 OR8K3Q8NH51 312 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 KIF18AQ8NI77 898 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 AGAP11Q8TF27 550 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 TANKQ92844 425 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 MARVELD3Q96A59 401 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 MTFMTQ96DP5 389 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 GAL3ST4Q96RP7 486 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 MRPL57Q9BQC6 102 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 MRPL46Q9H2W6 279 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 DDX31Q9H8H2 851 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 ZBTB26Q9HCK0 441 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 LYARQ9NX58 379 aaKnown RBP9.6□□□□□ -0.87
RBM39-236ENST00000490484 ENTPD4Q9Y227 616 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 MEMO1Q9Y316 297 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 ABCA12Q86UK0 2595 aa9.6□□□□□ -0.87
RBM39-236ENST00000490484 CSMD1Q96PZ7 3565 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 A0A1B0GTH9 108 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 A0A1W2PR48 441 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 WASHC1A8K0Z3 465 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 A8MT66 165 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 ACOT7O00154 380 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 FOXE1O00358 373 aaPredicted RBP9.59□□□□□ -0.87
RBM39-236ENST00000490484 PRRG2O14669 202 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 HNRNPRO43390 633 aaKnown RBP9.59□□□□□ -0.87
RBM39-236ENST00000490484 PROM1O43490 865 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 ZNF354AO60765 605 aaPredicted RBP9.59□□□□□ -0.87
RBM39-236ENST00000490484 SEMA3DO95025 777 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 IGKV3-11P04433 115 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 ABHD2P08910 425 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 RHOXF2BP0C7M4 288 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 FAM58BPP0C7Q3 252 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 COL6A2P12110 1019 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 HERVK_113P63132 956 aa9.59□□□□□ -0.87
RBM39-236ENST00000490484 ERVK-8P63133 956 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms