RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 NSUN5Q96P11 429 aaKnown RBP16.23■□□□□ 0.19
SEC13-218ENST00000490283 MYOTQ9UBF9 498 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 NPIPA1Q9UND3 350 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 SNX6Q9UNH7 406 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 ATG4BQ9Y4P1 393 aa16.23■□□□□ 0.19
SEC13-218ENST00000490283 SPTBN1Q01082 2364 aaKnown RBP16.23■□□□□ 0.19
SEC13-218ENST00000490283 A0A0A6YYD5 115 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 PROM1O43490 865 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 OR10H2O60403 315 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 SLC19A2O60779 497 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 EEDO75530 441 aaKnown RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 OR2J2O76002 312 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 FAM153BP0C7A2 387 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 ALOX15P16050 662 aaPredicted RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 BSGP35613 385 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 RNF4P78317 190 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 IGLV3-21P80748 117 aaPredicted RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 FAM153CQ494X1 144 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 C18orf63Q68DL7 685 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 CPSF7Q8N684 471 aaKnown RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 EIF1ADQ8N9N8 165 aaKnown RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 MYRIPQ8NFW9 859 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 ZNF483Q8TF39 744 aaPredicted RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 TSPAN10Q9H1Z9 355 aaPredicted RBP16.22■□□□□ 0.19
SEC13-218ENST00000490283 ZBTB26Q9HCK0 441 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 NMRK1Q9NWW6 199 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 SVILO95425 2214 aa16.22■□□□□ 0.19
SEC13-218ENST00000490283 COL12A1Q99715 3063 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 WWP2O00308 870 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 TFECO14948 347 aaPredicted RBP16.21■□□□□ 0.19
SEC13-218ENST00000490283 PEX1O43933 1283 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 PRKNO60260 465 aaPredicted RBP16.21■□□□□ 0.19
SEC13-218ENST00000490283 GUCY1B2O75343 617 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 SUPT7LO94864 414 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 ETHE1O95571 254 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 GPR75O95800 540 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 GCAP28676 217 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 MEOX1P50221 254 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 HK2P52789 917 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 HERVK_113P63132 956 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 SGO1Q5FBB7 561 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 OR52E8Q6IFG1 317 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 MRM1Q6IN84 353 aaKnown RBP16.21■□□□□ 0.19
SEC13-218ENST00000490283 OPN5Q6U736 354 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 IL20RBQ6UXL0 311 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 SLC22A9Q8IVM8 553 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 ST13P4Q8IZP2 240 aaPredicted RBP16.21■□□□□ 0.19
SEC13-218ENST00000490283 GHDCQ8N2G8 530 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 SELENOMQ8WWX9 145 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 C1QTNF3Q9BXJ4 246 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 ERVK-6Q9BXR3 956 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 ZNF717Q9BY31 904 aaPredicted RBP16.21■□□□□ 0.19
SEC13-218ENST00000490283 LIN28AQ9H9Z2 209 aaKnown RBP16.21■□□□□ 0.19
SEC13-218ENST00000490283 TBK1Q9UHD2 729 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 SH3BGRL2Q9UJC5 107 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 ADAM29Q9UKF5 820 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 STK38LQ9Y2H1 464 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 ASB4Q9Y574 426 aa16.21■□□□□ 0.19
SEC13-218ENST00000490283 GLOD5A6NK44 160 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 CCL21O00585 134 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 ASNA1O43681 348 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 TMPRSS11DO60235 418 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 ZG16O60844 167 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 GSTA1P08263 222 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 ABOP16442 354 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 ATP5F1P24539 256 aaPredicted RBP16.2■□□□□ 0.18
SEC13-218ENST00000490283 CA7P43166 264 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 CDH13P55290 713 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 CLCQ05315 142 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 CCNYL2Q5T2Q4 361 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 C6orf163Q5TEZ5 329 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 ZNF227Q86WZ6 799 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 SULF2Q8IWU5 870 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 GSPT2Q8IYD1 628 aaKnown RBP16.2■□□□□ 0.18
SEC13-218ENST00000490283 PSD4Q8NDX1 1056 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 TRPC4APQ8TEL6 797 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 UBLCP1Q8WVY7 318 aaPredicted RBP16.2■□□□□ 0.18
SEC13-218ENST00000490283 SREK1Q8WXA9 508 aaKnown RBP16.2■□□□□ 0.18
SEC13-218ENST00000490283 PPWD1Q96BP3 646 aaKnown RBP16.2■□□□□ 0.18
SEC13-218ENST00000490283 SENP5Q96HI0 755 aaPredicted RBP16.2■□□□□ 0.18
SEC13-218ENST00000490283 FBXL20Q96IG2 436 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 RASL10BQ96S79 203 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 CNPPD1Q9BV87 410 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 TMEM216Q9P0N5 145 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 TRPS1Q9UHF7 1281 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 SLC12A4Q9UP95 1085 aa16.2■□□□□ 0.18
SEC13-218ENST00000490283 DOPEY1Q5JWR5 2465 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 ICE1Q9Y2F5 2266 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 A0A1W2PR48 441 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 CYSRT1A8MQ03 144 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 GOLGA8RI6L899 631 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 ACOT7O00154 380 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 PRKRAO75569 313 aaKnown RBP16.19■□□□□ 0.18
SEC13-218ENST00000490283 OR6B1O95007 311 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 AIFM1O95831 613 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 CLDN1O95832 211 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 KRT6AP02538 564 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 GBAP04062 536 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 KRT6BP04259 564 aa16.19■□□□□ 0.18
SEC13-218ENST00000490283 KLK1P06870 262 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms