RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KLF13Q9Y2Y9 288 aaPredicted RBP18.37■□□□□ 0.53
SMC4-222ENST00000490207 YARS2Q9Y2Z4 477 aaKnown RBP18.37■□□□□ 0.53
SMC4-222ENST00000490207 ASB4Q9Y574 426 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 CROCCQ5TZA2 2017 aa18.37■□□□□ 0.53
SMC4-222ENST00000490207 GOLGA8RI6L899 631 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 PROM1O43490 865 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 FAM58BPP0C7Q3 252 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 TSPAN8P19075 237 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 CDH13P55290 713 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 HERVK_113P63132 956 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 RBPJQ06330 500 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 DOPEY1Q5JWR5 2465 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 LETMD1Q6P1Q0 360 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 C16orf47Q6ZP98 133 aaPredicted RBP18.36■□□□□ 0.53
SMC4-222ENST00000490207 FJX1Q86VR8 437 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 CPSF7Q8N684 471 aaKnown RBP18.36■□□□□ 0.53
SMC4-222ENST00000490207 ACMSDQ8TDX5 336 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 MZB1Q8WU39 189 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 SREK1Q8WXA9 508 aaKnown RBP18.36■□□□□ 0.53
SMC4-222ENST00000490207 GPR137Q96N19 417 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 ERVK-6Q9BXR3 956 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 TSPAN10Q9H1Z9 355 aaPredicted RBP18.36■□□□□ 0.53
SMC4-222ENST00000490207 LIN28AQ9H9Z2 209 aaKnown RBP18.36■□□□□ 0.53
SMC4-222ENST00000490207 WDR41Q9HAD4 459 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 MYOTQ9UBF9 498 aa18.36■□□□□ 0.53
SMC4-222ENST00000490207 A0A1B0GTL3 188 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 A0A1B0GUH1 482 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 TMEM200CA6NKL6 621 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 DYRK3O43781 588 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 OR2J2O76002 312 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 AIFM1O95831 613 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 GBAP04062 536 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 ALOX15P16050 662 aaPredicted RBP18.35■□□□□ 0.53
SMC4-222ENST00000490207 ZNF24P17028 368 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 TNFRSF8P28908 595 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 HK2P52789 917 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 CLCQ05315 142 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 BIKQ13323 160 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 SGO1Q5FBB7 561 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 MYRIPQ8NFW9 859 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 OR8K3Q8NH51 312 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 TRPC4APQ8TEL6 797 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 ZNF721Q8TF20 911 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 UBLCP1Q8WVY7 318 aaPredicted RBP18.35■□□□□ 0.53
SMC4-222ENST00000490207 ASB15Q8WXK1 588 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 ART5Q96L15 291 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 TMEM237Q96Q45 408 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 PELOQ9BRX2 385 aaKnown RBP18.35■□□□□ 0.53
SMC4-222ENST00000490207 TRPS1Q9UHF7 1281 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 ERVK-11Q9UQG0 969 aa18.35■□□□□ 0.53
SMC4-222ENST00000490207 NBPF19A0A087WUL8 3843 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 A0A1W2PR48 441 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 A8MVJ9 347 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 NPIPA5E9PKD4 350 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 WWP2O00308 870 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 PPP6CO00743 305 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 SUPT7LO94864 414 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 GSTA1P08263 222 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 PYGBP11216 843 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 ATP5F1P24539 256 aaPredicted RBP18.34■□□□□ 0.53
SMC4-222ENST00000490207 MEOX1P50221 254 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 RNF4P78317 190 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 UNC50Q53HI1 259 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 ZNF678Q5SXM1 525 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 HIST2H2BCQ6DN03 193 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 OR52E8Q6IFG1 317 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 SIAH3Q8IW03 269 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 GPALPP1Q8IXQ4 340 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 ST13P4Q8IZP2 240 aaPredicted RBP18.34■□□□□ 0.53
SMC4-222ENST00000490207 SELENOMQ8WWX9 145 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 PPWD1Q96BP3 646 aaKnown RBP18.34■□□□□ 0.53
SMC4-222ENST00000490207 RBM18Q96H35 190 aaKnown RBP18.34■□□□□ 0.53
SMC4-222ENST00000490207 RASL10BQ96S79 203 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 MRPL1Q9BYD6 325 aaKnown RBP18.34■□□□□ 0.53
SMC4-222ENST00000490207 TIMMDC1Q9NPL8 285 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 HPF1Q9NWY4 346 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 TEX10Q9NXF1 929 aaPredicted RBP18.34■□□□□ 0.53
SMC4-222ENST00000490207 AHSPQ9NZD4 102 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 ADAM29Q9UKF5 820 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 NPIPA1Q9UND3 350 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 SNX6Q9UNH7 406 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 SLC12A4Q9UP95 1085 aa18.34■□□□□ 0.53
SMC4-222ENST00000490207 TRGV8A0A0C4DH27 118 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 GLOD5A6NK44 160 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 OR10H2O60403 315 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 DLX3O60479 287 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 WISP2O76076 250 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 OR4F21O95013 312 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 GPR75O95800 540 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 CLDN1O95832 211 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 PDYNP01213 254 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 HSD17B3P37058 310 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 SOX3P41225 446 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.33■□□□□ 0.52
SMC4-222ENST00000490207 KRTCAP3Q53RY4 240 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 FAM219BQ5XKK7 198 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 DGAT2L6Q6ZPD8 337 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 PAGE2Q7Z2X7 111 aa18.33■□□□□ 0.52
SMC4-222ENST00000490207 MAMDC2Q7Z304 686 aaPredicted RBP18.33■□□□□ 0.52
SMC4-222ENST00000490207 SLC22A9Q8IVM8 553 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms