RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CHCHD3Q9NX63 227 aaKnown RBP14.93□□□□□ -0.02
BRD9-208ENST00000489816 POFUT2Q9Y2G5 429 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 ARAFP10398 606 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 PDE7AQ13946 482 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 NRSN1Q8IZ57 195 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 LINC01555Q8NAE3 123 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 IPCEF1Q8WWN9 437 aaPredicted RBP14.93□□□□□ -0.02
BRD9-208ENST00000489816 CHFRQ96EP1 664 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 LRIG1Q96JA1 1093 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 CRISPLD2Q9H0B8 497 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 MVB12BQ9H7P6 319 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 BRWD1Q9NSI6 2320 aa14.93□□□□□ -0.02
BRD9-208ENST00000489816 PLXNA2O75051 1894 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 KIAA1671Q9BY89 1806 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 ZW10O43264 779 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 NARSO43776 548 aaKnown RBP14.92□□□□□ -0.02
BRD9-208ENST00000489816 ENTPD6O75354 484 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 SRPRAP08240 638 aaKnown RBP14.92□□□□□ -0.02
BRD9-208ENST00000489816 ALOX12P18054 663 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 DDX6P26196 483 aaKnown RBP eCLIP14.92□□□□□ -0.02
BRD9-208ENST00000489816 HTRA4P83105 476 aaPredicted RBP14.92□□□□□ -0.02
BRD9-208ENST00000489816 FCHO2Q0JRZ9 810 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 TARDBPQ13148 414 aaKnown RBP eCLIP14.92□□□□□ -0.021e-14■■■■■ 72.7
BRD9-208ENST00000489816 KRT33BQ14525 404 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 OXA1LQ15070 435 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 FRMPD2BQ6IN97 320 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 TMEM203Q969S6 136 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 FCRL4Q96PJ5 515 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 ZNF717Q9BY31 904 aaPredicted RBP14.92□□□□□ -0.02
BRD9-208ENST00000489816 WDR12Q9GZL7 423 aaKnown RBP14.92□□□□□ -0.02
BRD9-208ENST00000489816 TBCCD1Q9NVR7 557 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 SEC14L3Q9UDX4 400 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 SPTBP11277 2137 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 PDPK1O15530 556 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 KRT75O95678 551 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 SEC13P55735 322 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 C21orf58P58505 322 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 RAB8AP61006 207 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 HOXC5Q00444 222 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 GPR19Q15760 415 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 ZNF630Q2M218 657 aaPredicted RBP14.92□□□□□ -0.02
BRD9-208ENST00000489816 ZNF404Q494X3 552 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 TCTN3Q6NUS6 607 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 ARMC8Q8IUR7 673 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 SLC34A3Q8N130 599 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 CYP4Z2PQ8N1L4 340 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 FGF13Q92913 245 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 ARSGQ96EG1 525 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 PHOX2BQ99453 314 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 RAD9AQ99638 391 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 TMEM165Q9HC07 324 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 LHX9Q9NQ69 397 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 SEMA3GQ9NS98 782 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 MARK1Q9P0L2 795 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 FBXW2Q9UKT8 454 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 IRAK3Q9Y616 596 aa14.92□□□□□ -0.02
BRD9-208ENST00000489816 A0A1W2PP55 124 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 CTDSP2O14595 271 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 DSCR3O14972 297 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 CCT3P49368 545 aaKnown RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 MXD1Q05195 221 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 ZNF33BQ06732 778 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 FADDQ13158 208 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 BCL7AQ4VC05 210 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 ETFBKMTQ8IXQ9 262 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 CCDC116Q8IYX3 515 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 CPA6Q8N4T0 437 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 TCEANCQ8N8B7 351 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 POC5Q8NA72 575 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 GOT1L1Q8NHS2 421 aaPredicted RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 SIGLEC11Q96RL6 698 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 IFT52Q9Y366 437 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 PRAMEF27A3QJZ7 478 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 LINC01553A4QN01 128 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 PDZK1P1A8MUH7 402 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 RGS5O15539 181 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 ITGA2P17301 1181 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 DDCP20711 480 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 KELP23276 732 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 BSGP35613 385 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 SSR2P43308 183 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 CDC42P60953 191 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 CDK3Q00526 305 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 MLLT1Q03111 559 aaPredicted RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 NIPAL1Q6NVV3 410 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 RD3Q7Z3Z2 195 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 DCUN1D3Q8IWE4 304 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 GPR65Q8IYL9 337 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 OR8K5Q8NH50 307 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 AIF1LQ9BQI0 150 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 SERHL2Q9H4I8 314 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 ZCCHC3Q9NUD5 404 aaKnown RBP14.91□□□□□ -0.02
BRD9-208ENST00000489816 C14orf119Q9NWQ9 140 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 TVP23BQ9NYZ1 205 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 EDDM13A0A1B0GTR0 161 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 SOBPA7XYQ1 873 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 SLC35G4P0C7Q5 338 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 NR2F1P10589 423 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 UQCRC2P22695 453 aa14.91□□□□□ -0.02
BRD9-208ENST00000489816 RGS6P49758 472 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms