RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TRAF6Q9Y4K3 522 aa7.36□□□□□ -1.23
SSR1-210ENST00000489567 MMACHCQ9Y4U1 282 aa7.36□□□□□ -1.23
SSR1-210ENST00000489567 TNRC6AQ8NDV7 1962 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 CHD6Q8TD26 2715 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 CLDN4O14493 209 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 PCDH17O14917 1159 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 SERPINE1P05121 402 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 JUNP05412 331 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 LINC00032P0C843 101 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 CD97P48960 835 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 MAPK12P53778 367 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 SLC18A1P54219 525 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 ABCE1P61221 599 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 FOLH1Q04609 750 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 ZNF33BQ06732 778 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 BTBD16Q32M84 506 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 SPDYAQ5MJ70 313 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 NDUFAF5Q5TEU4 345 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 HHATQ5VTY9 493 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 B3GNTL1Q67FW5 361 aaPredicted RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 PLAG1Q6DJT9 500 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 TCTN3Q6NUS6 607 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 DGAT2L6Q6ZPD8 337 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 KIF2BQ8N4N8 673 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 ZNF781Q8N8C0 355 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 NFAM1Q8NET5 270 aaPredicted RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 BRIX1Q8TDN6 353 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 TWIST2Q8WVJ9 160 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 TM4SF18Q96CE8 201 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 C3orf30Q96M34 536 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 SORT1Q99523 831 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 SMAD5Q99717 465 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 TUBB6Q9BUF5 446 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 EBPLQ9BY08 206 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 ALOXE3Q9BYJ1 711 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 SLC25A18Q9H1K4 315 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 PNO1Q9NRX1 252 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 RIC8BQ9NVN3 520 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 LYARQ9NX58 379 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 AHSPQ9NZD4 102 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 C5AR2Q9P296 337 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 C19orf25Q9UFG5 118 aaPredicted RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 PHF11Q9UIL8 331 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 MRPS33Q9Y291 106 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 PCDHGA9Q9Y5G4 932 aaKnown RBP7.35□□□□□ -1.23
SSR1-210ENST00000489567 ATRXP46100 2492 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 PIEZO2Q9H5I5 2752 aa7.35□□□□□ -1.23
SSR1-210ENST00000489567 PIP5K1BO14986 540 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 PCDH7O60245 1069 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 MAN1A2O60476 641 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 MYO1DO94832 1006 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 SERPINA7P05543 415 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 NR2F6P10588 404 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 NAT1P18440 290 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 SOX11P35716 441 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 SERPINB5P36952 375 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 BUD31P41223 144 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 SLC1A6P48664 564 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 ST13P50502 369 aaKnown RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 SLC26A5P58743 744 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 IGLV3-21P80748 117 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 ACTN3Q08043 901 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 ACSM2AQ08AH3 577 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 BST1Q10588 318 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 KIAA0040Q15053 153 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 ZNF750Q32MQ0 723 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 LACTB2Q53H82 288 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 ACSM2BQ68CK6 577 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 FAM180BQ6P0A1 224 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 PAGE2Q7Z2X7 111 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 PTRH1Q86Y79 214 aaKnown RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 KBTBD2Q8IY47 623 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 CLYBLQ8N0X4 340 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 SIRT6Q8N6T7 355 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 PPP1R14CQ8TAE6 165 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 DNAJB14Q8TBM8 379 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 DOK4Q8TEW6 326 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 PPWD1Q96BP3 646 aaKnown RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 LPAR4Q99677 370 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 NPAS2Q99743 824 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 LHPPQ9H008 270 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 EML4Q9HC35 981 aaKnown RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 NMRK1Q9NWW6 199 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 MS4A12Q9NXJ0 267 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 HEY2Q9UBP5 337 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 VTI1BQ9UEU0 232 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 GIMAP2Q9UG22 337 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 ZNF223Q9UK11 482 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 POLR3HQ9Y535 204 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 CSAG2Q9Y5P2 127 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 SPACA6W5XKT8 324 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 DOCK10Q96BY6 2186 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 ATP6AP2A0A1C7CYW4 349 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 SAGE2PA6NJ88 616 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 TMEM114B3SHH9 223 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 HRKO00198 91 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 LSM1O15116 133 aaKnown RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 SKAP2O75563 359 aaPredicted RBP7.34□□□□□ -1.23
SSR1-210ENST00000489567 ATP6AP2O75787 350 aa7.34□□□□□ -1.23
SSR1-210ENST00000489567 RSL1D1O76021 490 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms