RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 ZNF146Q15072 292 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 MLF2Q15773 248 aaPredicted RBP2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 UPP1Q16831 310 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 FAM131BQ86XD5 332 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 CACUL1Q86Y37 369 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 TBC1D10CQ8IV04 446 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 SERPINA12Q8IW75 414 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 FBXW8Q8N3Y1 598 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 PRSS33Q8NF86 280 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 C8orf46Q8TAG6 207 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 SPPL2AQ8TCT8 520 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 LRRC15Q8TF66 581 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 UBTD2Q8WUN7 234 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 ALKBH3Q96Q83 286 aaPredicted RBP2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 NTMT1Q9BV86 223 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 ACAT2Q9BWD1 397 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 PINK1Q9BXM7 581 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 PARLQ9H300 379 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 IL1RAPQ9NPH3 570 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 ZCCHC3Q9NUD5 404 aaKnown RBP2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 DNAJC11Q9NVH1 559 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 THAP10Q9P2Z0 257 aaPredicted RBP2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 UMODL1Q5DID0 1318 aa2.92□□□□□ -1.94
AC055855.1-201ENST00000489563 MYO9AB2RTY4 2548 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 DNHD1Q96M86 4753 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 IGHV3-38A0A0C4DH36 116 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 TRIM64A6NGJ6 449 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 TRIM64BA6NI03 449 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 SRRM4A7MD48 611 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 DDX39AO00148 427 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ZNF749O43361 778 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 SNAP91O60641 907 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ATP6V1G1O75348 118 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 CPNE6O95741 557 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 VDRP11473 427 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 P4HA1P13674 534 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 SELEP16581 610 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ZNF10P21506 573 aaPredicted RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 OR1D2P34982 312 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 FHITP49789 147 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 CCR4P51679 360 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 FKBP3Q00688 224 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 GALK2Q01415 458 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 CBX3Q13185 183 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 PDE7AQ13946 482 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 KRT31Q15323 416 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 STX1AQ16623 288 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ECSCRQ19T08 205 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 KNOP1Q1ED39 458 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 CAPN13Q6MZZ7 669 aaPredicted RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 CDHR3Q6ZTQ4 885 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 MCM10Q7L590 875 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 KCNMB4Q86W47 210 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 SFRP1Q8N474 314 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ZNF485Q8NCK3 441 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 MIPOL1Q8TD10 442 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 MGARPQ8TDB4 240 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 RNASE8Q8TDE3 154 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 NPRL2Q8WTW4 380 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 CHPT1Q8WUD6 406 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 TCP11Q8WWU5 503 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ATP6V0A1Q93050 837 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 ANKRD27Q96NW4 1050 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 GAL3ST4Q96RP7 486 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 SSX3Q99909 188 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 RBM4BQ9BQ04 359 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 FAM213AQ9BRX8 229 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 TSPYL1Q9H0U9 437 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 PANK3Q9H999 370 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 WDR41Q9HAD4 459 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 FOXA2Q9Y261 457 aaPredicted RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 URB2Q14146 1524 aaKnown RBP2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 DLC1Q96QB1 1528 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 KIAA0586Q9BVV6 1533 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 JMJD1CQ15652 2540 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 TTC37Q6PGP7 1564 aa2.91□□□□□ -1.94
AC055855.1-201ENST00000489563 WDFY4Q6ZS81 3184 aa2.9□□□□□ -1.94
AC055855.1-201ENST00000489563 ADCY9O60503 1353 aa2.9□□□□□ -1.94
AC055855.1-201ENST00000489563 A0A1B0GU03 582 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 OR5H15A6NDH6 313 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 SHISA7A6NL88 538 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 PDHXO00330 501 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 OGTO15294 1046 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 CSO75390 466 aaKnown RBP2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 PRDM1O75626 825 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 STBD1O95210 358 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 OR6A2O95222 327 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 BAG2O95816 211 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 PCP11498 1178 aaKnown RBP2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 UGT1A6P19224 532 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 CYP3A5P20815 502 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 PPP2R1AP30153 589 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 TNFSF10P50591 281 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 CRYBA2P53672 197 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 NDUFV3P56181 108 aaKnown RBP2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 SRPXP78539 464 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 GFPT1Q06210 699 aaPredicted RBP2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 AP1B1Q10567 949 aa2.9□□□□□ -1.95
AC055855.1-201ENST00000489563 RAPSNQ13702 412 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms