RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 MESP1Q9BRJ9 268 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 VN1R1Q9GZP7 353 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF700Q9H0M5 742 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 KLHL31Q9H511 634 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ELOVL6Q9H5J4 265 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF385DQ9H6B1 395 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 AKTIPQ9H8T0 292 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ZBTB20Q9HC78 741 aaPredicted RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 HCN3Q9P1Z3 774 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 MAP10Q9P2G4 905 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 C19orf25Q9UFG5 118 aaPredicted RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 NAALAD2Q9Y3Q0 740 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 CCDC88CQ9P219 2028 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 NUP210LQ5VU65 1888 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 NBASA2RRP1 2371 aa9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 ASH1LQ9NR48 2969 aaKnown RBP9.93□□□□□ -0.82
SCAMP4-208ENST00000489554 A0A0G2JND7 137 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 LRIT2A6NDA9 550 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 URADA6NGE7 173 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 TRPC5OSA6NMA1 111 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 DIAPH2O60879 1101 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 RDH16O75452 317 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 TGFB1P01137 390 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SERPIND1P05546 499 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SERPINA6P08185 405 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 ALOX12P18054 663 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SERPINB1P30740 379 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 RAE1P78406 368 aaKnown RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 BNIP1Q12981 228 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 MFAP5Q13361 173 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CUL3Q13618 768 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 PCOLCEQ15113 449 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 TLR1Q15399 786 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 HIST2H2ACQ16777 129 aaPredicted RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 GALNTL6Q49A17 601 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 MINDY4Q4G0A6 757 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 PRR30Q53SZ7 412 aaPredicted RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 C6orf136Q5SQH8 315 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 DEPDC1Q5TB30 811 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 MFSD4BQ5TF39 518 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 KHDRBS2Q5VWX1 349 aaKnown RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 TMEM198Q66K66 360 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 B3GNTL1Q67FW5 361 aaPredicted RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 HIST2H2AA3Q6FI13 130 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 OGFOD2Q6N063 350 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CHSY3Q70JA7 882 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 ABHD13Q7L211 337 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 PDSS2Q86YH6 399 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 TTLQ8NG68 377 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 DNAJB14Q8TBM8 379 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CHTF18Q8WVB6 975 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 REPS1Q96D71 796 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SNRNP40Q96DI7 357 aaKnown RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 OR1F2PQ96R84 312 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 F2RL3Q96RI0 385 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CCT7Q99832 543 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CCDC28BQ9BUN5 200 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 OR51B5Q9H339 312 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CLK4Q9HAZ1 481 aaKnown RBP9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SIRT5Q9NXA8 310 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 ADGRE2Q9UHX3 823 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SLC12A4Q9UP95 1085 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 CAPN7Q9Y6W3 813 aa9.92□□□□□ -0.82
SCAMP4-208ENST00000489554 SPENQ96T58 3664 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 ANKDD1BA6NHY2 528 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 SLC28A1O00337 649 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 PLPP1O14494 284 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 GALR3O60755 368 aaPredicted RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 PEX11AO75192 247 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 SH3BGRLO75368 114 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 JRKO75564 520 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 CHEK2O96017 543 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 B3GALT4O96024 378 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 GNLYP22749 145 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 JAK1P23458 1154 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 BSGP35613 385 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 SOX11P35716 441 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 TSFMP43897 325 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 MNAT1P51948 309 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF169Q14929 603 aaPredicted RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 DEFB134Q4QY38 66 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 RFTN2Q52LD8 501 aaPredicted RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 FAM91A1Q658Y4 838 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 ZNF793Q6ZN11 406 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 LINC00696Q6ZRV3 163 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 CPEB2Q7Z5Q1 589 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 SHISA5Q8N114 240 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 METTL4Q8N3J2 472 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 CISD2Q8N5K1 135 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 BRIX1Q8TDN6 353 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 PSMF1Q92530 271 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 MS4A6EQ96DS6 147 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 CMTM7Q96FZ5 175 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 IMMP1LQ96LU5 166 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 QRFPRQ96P65 431 aa9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 SORBS1Q9BX66 1292 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 MRPL1Q9BYD6 325 aaKnown RBP9.91□□□□□ -0.82
SCAMP4-208ENST00000489554 TCF7L2Q9NQB0 619 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms