RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 MSH2P43246 934 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 NR4A2P43354 598 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 MAGEA6P43360 314 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 HCAR3P49019 387 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 PAPOLAP51003 745 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC26A5P58743 744 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CRYZQ08257 329 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC10A7Q0GE19 358 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 USP10Q14694 798 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 MUM1Q2TAK8 710 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 TNFAIP8L3Q5GJ75 292 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 WASHC2DQ5SRD0 308 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 HP1BP3Q5SSJ5 553 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 GKAP1Q5VSY0 366 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 ANKRD22Q5VYY1 191 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 NCBP2-AS2Q69YL0 99 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 RFX8Q6ZV50 586 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 MEPCEQ7L2J0 689 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 EXOC3L1Q86VI1 746 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 LINC00528Q8N1L1 170 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 PGBD5Q8N414 524 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 SYT14Q8NB59 555 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CCNYQ8ND76 341 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 GPR26Q8NDV2 337 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 FBXO36Q8NEA4 188 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 NEIL3Q8TAT5 605 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 ZNF473Q8WTR7 871 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 GATAD1Q8WUU5 269 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 EID2BQ96D98 161 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CHMP6Q96FZ7 201 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 ZFP3Q96NJ6 502 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 FAM111AQ96PZ2 611 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CDK15Q96Q40 435 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 MGME1Q9BQP7 344 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 C10orf88Q9H8K7 445 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CALHM2Q9HA72 323 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 UGT1A8Q9HAW9 530 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 DDX28Q9NUL7 540 aaKnown RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 ETNK2Q9NVF9 386 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 NECAP2Q9NVZ3 263 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 KCMF1Q9P0J7 381 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 STOX2Q9P2F5 926 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 NFKBIL1Q9UBC1 381 aaPredicted RBP6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 ICKQ9UPZ9 632 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 CHMP2BQ9UQN3 213 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 KLHL20Q9Y2M5 609 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 MUC4Q99102 2169 aa6.79□□□□□ -1.32
EXOSC3-206ENST00000489414 IQANK1A0A1B0GTG1 560 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 TMEM120BA0PK00 339 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 CFAP99D6REC4 459 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 G3V3Y1 287 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 C16orf97H3BN30 126 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 AP3B1O00203 1094 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 PRPF4O43172 522 aaKnown RBP eCLIP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 CTSVO60911 334 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 VIMP08670 466 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ZNF23P17027 643 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 PBLDP30039 288 aaPredicted RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 PEBP1P30086 187 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 AGTR2P50052 363 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 GBE1Q04446 702 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 DPYSQ14117 519 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 FASTKD3Q14CZ7 662 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 PAFAH1B3Q15102 231 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 SYT16Q17RD7 645 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 RALGPS1Q5JS13 557 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ITPRIPL1Q6GPH6 555 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ZNF474Q6S9Z5 364 aaPredicted RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 UNC5AQ6ZN44 842 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ARHGAP36Q6ZRI8 547 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 PYROXD2Q8N2H3 581 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 TMEM156Q8N614 296 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ANKRD42Q8N9B4 389 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 RASGEF1AQ8N9B8 481 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 FAM110DQ8TAY7 271 aaPredicted RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 LRRN4Q8WUT4 740 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 HTRA1Q92743 480 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 NEUROG1Q92886 237 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 MVB12AQ96EY5 273 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 CFAP36Q96G28 342 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 COL21A1Q96P44 957 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 PPP1R2P1Q96PQ5 205 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 VPS35Q96QK1 796 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 FERD3LQ96RJ6 166 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 LPAR4Q99677 370 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 TIMP4Q99727 224 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 FAM173AQ9BQD7 235 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 NAT9Q9BTE0 207 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC39A8Q9C0K1 460 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 SLC6A15Q9H2J7 730 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 TRABDQ9H4I3 376 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 RABEP2Q9H5N1 569 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 CCDC134Q9H6E4 229 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ACSS3Q9H6R3 686 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 C12orf49Q9H741 205 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ETNK1Q9HBU6 452 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 EIF2B3Q9NR50 452 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 SYBUQ9NX95 663 aa6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 ZC3H7BQ9UGR2 993 aaKnown RBP6.78□□□□□ -1.32
EXOSC3-206ENST00000489414 RNF112Q9ULX5 631 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms