RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 OR1D2P34982 312 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 SPRP35270 261 aaPredicted RBP2.69□□□□□ -1.98
RFC4-213ENST00000489028 IER3P46695 156 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 SLC1A6P48664 564 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 FHITP49789 147 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ADARP55265 1226 aaKnown RBP2.69□□□□□ -1.98
RFC4-213ENST00000489028 PPP2R5CQ13362 524 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 SLC22A6Q4U2R8 563 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ANKRD20A4Q4UJ75 823 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ANKRD20A8PQ5CZ79 823 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 GLRA4Q5JXX5 417 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ANKRD20A2Q5SQ80 823 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ANKRD20A1Q5TYW2 823 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ANKRD20A3Q5VUR7 823 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 LYPLAL1Q5VWZ2 237 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ARMCX5Q6P1M9 558 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 CASC4Q6P4E1 433 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 NHLRC1Q6VVB1 395 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ZNF730Q6ZMV8 503 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ZSCAN30Q86W11 494 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 AQP12AQ8IXF9 295 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 SYCP3Q8IZU3 236 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 CARNMT1Q8N4J0 409 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ZNF781Q8N8C0 355 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ARL10Q8N8L6 244 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 RNF149Q8NC42 400 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 FLVCR1-AS1Q8TAF5 88 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 FIBINQ8TAL6 211 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 PTP4A1Q93096 173 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ZNF274Q96GC6 653 aaPredicted RBP2.69□□□□□ -1.98
RFC4-213ENST00000489028 ANKRD27Q96NW4 1050 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 UBE2TQ9NPD8 197 aaPredicted RBP2.69□□□□□ -1.98
RFC4-213ENST00000489028 VPS18Q9P253 973 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 ZNF319Q9P2F9 582 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 CELA1Q9UNI1 258 aa2.69□□□□□ -1.98
RFC4-213ENST00000489028 TRAV9-2A0A087WT02 112 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 FAM168BA1KXE4 195 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 BCLAF3A2AJT9 711 aaKnown RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 FOXI3A8MTJ6 420 aaPredicted RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 DDX39AO00148 427 aaKnown RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 E2F3O00716 465 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 SRPX2O60687 465 aaPredicted RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 KBTBD11O94819 623 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 LETM1O95202 739 aaPredicted RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 LYNP07948 512 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 OR9G9P0C7N8 305 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 ODC1P11926 461 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 SKILP12757 684 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 ANPEPP15144 967 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 HLA-DPA1P20036 260 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 IST1P53990 364 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 SNU13P55769 128 aaKnown RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 STX1BP61266 288 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 LCP2Q13094 533 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 LTB4RQ15722 352 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 C17orf58Q2M2W7 97 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 TIMM50Q3ZCQ8 353 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 IQCCQ4KMZ1 466 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 VWA2Q5GFL6 755 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 UTF1Q5T230 341 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 ZNF491Q8N8L2 437 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 NHLRC2Q8NBF2 726 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 PSMA8Q8TAA3 256 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 CKAP2Q8WWK9 683 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 TEKT1Q969V4 418 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 NTNG2Q96CW9 530 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 SERAC1Q96JX3 654 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 PARK7Q99497 189 aaKnown RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 UTP14AQ9BVJ6 771 aaKnown RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 SP140LQ9H930 580 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 VIPAS39Q9H9C1 493 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 FAM212BQ9NTI7 297 aaPredicted RBP2.68□□□□□ -1.98
RFC4-213ENST00000489028 SLC6A5Q9Y345 797 aa2.68□□□□□ -1.98
RFC4-213ENST00000489028 NEDD8-MDP1E9PL57 170 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 M0R296 226 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 HTATSF1O43719 755 aaKnown RBP2.67□□□□□ -1.98
RFC4-213ENST00000489028 PNPP00491 289 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 CCDC159P0C7I6 412 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 ASIC1P78348 528 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 AKAP17AQ02040 695 aaKnown RBP2.67□□□□□ -1.98
RFC4-213ENST00000489028 TEFQ10587 303 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 RCN2Q14257 317 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 SLC17A1Q14916 467 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 FUT11Q495W5 492 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 FHL5Q5TD97 284 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 PLBD1Q6P4A8 553 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 GBP6Q6ZN66 633 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 WDR49Q8IV35 697 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 CLYBLQ8N0X4 340 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 CLEC1AQ8NC01 280 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 GTSF1Q8WW33 167 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 CDHR1Q96JP9 859 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 C17orf62Q9BQA9 187 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 ZNF559Q9BR84 538 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 ACAT2Q9BWD1 397 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 TRIM7Q9C029 511 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 TUFT1Q9NNX1 390 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 CUTCQ9NTM9 273 aa2.67□□□□□ -1.98
RFC4-213ENST00000489028 CWC25Q9NXE8 425 aaPredicted RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms