RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CPN2P22792 545 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 SERPINB1P30740 379 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 PAFAH1B1P43034 410 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 STT3AP46977 705 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 GNG11P61952 73 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 IGLV3-21P80748 117 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-231ENST00000488905 MPEG1Q2M385 716 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 HYAL4Q2M3T9 481 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 AP5B1Q2VPB7 878 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 MED27Q6P2C8 311 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 TMEM200AQ86VY9 491 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 C9orf40Q8IXQ3 194 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 C7orf57Q8NEG2 295 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 NUBPLQ8TB37 319 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 DGAT2Q96PD7 388 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 ZNF559Q9BR84 538 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 TTYH2Q9BSA4 534 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 ALG9Q9H6U8 611 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 TUBA8Q9NY65 449 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-231ENST00000488905 KCNN3Q9UGI6 736 aa17.02■□□□□ 0.32
HDAC6-231ENST00000488905 SAP18O00422 153 aaKnown RBP17.01■□□□□ 0.31
HDAC6-231ENST00000488905 EIF3HO15372 352 aaKnown RBP eCLIP17.01■□□□□ 0.31
HDAC6-231ENST00000488905 SUSD5O60279 629 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 TGFB1P01137 390 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 C1QAP02745 245 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 IGKV3-11P04433 115 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 GMPRP36959 345 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 MAN2A2P49641 1150 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 MRPS25P82663 173 aaKnown RBP17.01■□□□□ 0.31
HDAC6-231ENST00000488905 PLIN5Q00G26 463 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 ASPHQ12797 758 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 CALCOCO2Q13137 446 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 KHDRBS2Q5VWX1 349 aaKnown RBP17.01■□□□□ 0.31
HDAC6-231ENST00000488905 CHSY3Q70JA7 882 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 OR7G3Q8NG95 312 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 OR10Q1Q8NGQ4 319 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 UBTD2Q8WUN7 234 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 CMTM7Q96FZ5 175 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 DPH5Q9H2P9 285 aa17.01■□□□□ 0.31
HDAC6-231ENST00000488905 ATP6AP2A0A1C7CYW4 349 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SUPT3HB4E1H0 165 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 DYRK3O43781 588 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 KLK8O60259 260 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 WDR1O75083 606 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SUPT3HO75486 399 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ATP6AP2O75787 350 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SLC35E2BP0CK96 405 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 GLI4P10075 376 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 MYBPHQ13203 477 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SLMAPQ14BN4 828 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ZNF791Q3KP31 576 aaPredicted RBP17■□□□□ 0.31
HDAC6-231ENST00000488905 PIGGQ5H8A4 983 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 RTL6Q6ICC9 239 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 GRHL2Q6ISB3 625 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ADGRD1Q6QNK2 874 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 CYS1Q717R9 158 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 CMC1Q7Z7K0 106 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 OR4N5Q8IXE1 308 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 CLYBLQ8N0X4 340 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 STAG3L4Q8TBR4 150 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SLC22A8Q8TCC7 542 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SARAFQ96BY9 339 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SENP5Q96HI0 755 aaPredicted RBP17■□□□□ 0.31
HDAC6-231ENST00000488905 FBXL20Q96IG2 436 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ART5Q96L15 291 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ATOH8Q96SQ7 321 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SORBS1Q9BX66 1292 aaKnown RBP17■□□□□ 0.31
HDAC6-231ENST00000488905 OR51B5Q9H339 312 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 LDAHQ9H6V9 325 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ZNF703Q9H7S9 590 aaPredicted RBP17■□□□□ 0.31
HDAC6-231ENST00000488905 SLC24A3Q9HC58 644 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SH2D2AQ9NP31 389 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 SEMA4BQ9NPR2 832 aaPredicted RBP17■□□□□ 0.31
HDAC6-231ENST00000488905 MS4A12Q9NXJ0 267 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 WHRNQ9P202 907 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 OPTCQ9UBM4 332 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 ACAD8Q9UKU7 415 aa17■□□□□ 0.31
HDAC6-231ENST00000488905 A0A0G2JNJ9 132 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 K7EPI3 171 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 UBXN8O00124 270 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 HRKO00198 91 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 HCN1O60741 890 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 KERAO60938 352 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 NADKO95544 446 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 CD1EP15812 388 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 ENDOUP21128 410 aaKnown RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 SPRP35270 261 aaPredicted RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 PIGAP37287 484 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 ZFP36L2P47974 494 aaKnown RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 RAP1GDS1P52306 607 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 GPX6P59796 221 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 TNFRSF17Q02223 184 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 FOLH1Q04609 750 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 PCDH1Q08174 1060 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 DLG1Q12959 904 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 DDX39BQ13838 428 aaKnown RBP16.99■□□□□ 0.31
HDAC6-231ENST00000488905 SLC10A1Q14973 349 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 C1orf185Q5T7R7 199 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 DEPDC1Q5TB30 811 aa16.99■□□□□ 0.31
HDAC6-231ENST00000488905 CES4AQ5XG92 561 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms