RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 C7orf57Q8NEG2 295 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 OR14A16Q8NHC5 309 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 UTP23Q9BRU9 249 aaKnown RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 TMEM109Q9BVC6 243 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 SLC29A3Q9BZD2 475 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 ROPN1BQ9BZX4 212 aaPredicted RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 ROPN1Q9HAT0 212 aaPredicted RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 AGPAT4Q9NRZ5 378 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 TEX10Q9NXF1 929 aaPredicted RBP14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 AHSPQ9NZD4 102 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 ABI3Q9P2A4 366 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 SLC12A4Q9UP95 1085 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 PLLPQ9Y342 182 aa14.85□□□□□ -0.03
CTDSP1-209ENST00000488627 C17orf105B2RV13 164 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 PGRMC2O15173 223 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 ZFAND5O76080 213 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 ESRRBO95718 433 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 GPR75O95800 540 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 KRT6AP02538 564 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 KRT6BP04259 564 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 CPA3P15088 417 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 BUD31P41223 144 aaPredicted RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 STT3AP46977 705 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 KRT6CP48668 564 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 HTR6P50406 440 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 BIKQ13323 160 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 INAQ16352 499 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 EIF2S3LQ2VIR3 472 aaKnown RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF766Q5HY98 468 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 C16orf47Q6ZP98 133 aaPredicted RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 COMMD6Q7Z4G1 85 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 CCNYL1Q8N7R7 359 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 BANPQ8N9N5 519 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 RDH11Q8TC12 318 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 METTL6Q8TCB7 284 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 SLC2A12Q8TD20 617 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 ZNF721Q8TF20 911 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 AGAP11Q8TF27 550 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 THAP3Q8WTV1 239 aaPredicted RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 CHTF18Q8WVB6 975 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 PPWD1Q96BP3 646 aaKnown RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 SCMH1Q96GD3 660 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 SENP5Q96HI0 755 aaPredicted RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 SLX1AQ9BQ83 275 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 HES7Q9BYE0 225 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 OXSMQ9NWU1 459 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 MKS1Q9NXB0 559 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 TIMM22Q9Y584 194 aa14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 PRRC2CQ9Y520 2896 aaKnown RBP14.84□□□□□ -0.03
CTDSP1-209ENST00000488627 A0A1W2PS29 197 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 ULK1O75385 1050 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 WISP2O76076 250 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 IGKV3-11P04433 115 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 ENO1P06733 434 aaKnown RBP14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 NR2F6P10588 404 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 HSD3B1P14060 373 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 TNNI3P19429 210 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 HSD3B2P26439 372 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 HLCSP50747 726 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 FOXA1P55317 472 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 UBAP2LQ14157 1087 aaKnown RBP14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 CCNYL2Q5T2Q4 361 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 FAM180AQ6UWF9 173 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 FRMD7Q6ZUT3 714 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 PAGE2Q7Z2X7 111 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 BCORP1Q8N888 145 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 ST6GALNAC3Q8NDV1 305 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 SUN3Q8TAQ9 357 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 TM4SF18Q96CE8 201 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 C11orf24Q96F05 449 aaPredicted RBP14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 RBM18Q96H35 190 aaKnown RBP14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 KCNA7Q96RP8 456 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 ACPTQ9BZG2 426 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 OR8D2Q9GZM6 311 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 LIN28AQ9H9Z2 209 aaKnown RBP14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 TNFRSF12AQ9NP84 129 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 LRFN1Q9P244 771 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 VPS29Q9UBQ0 182 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 STK38LQ9Y2H1 464 aa14.83□□□□□ -0.04
CTDSP1-209ENST00000488627 POLEQ07864 2286 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 SERTM1A2A2V5 107 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 ANKUB1A6NFN9 424 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 HRKO00198 91 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 RASAL1O95294 804 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 ALOX15P16050 662 aaPredicted RBP14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 HMOX2P30519 316 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 CYB561P49447 251 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 TDGF1P3P51864 188 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 NAA20P61599 178 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 OC90Q02509 493 aaPredicted RBP14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 IFFO1Q0D2I5 559 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 CSTF3Q12996 717 aaKnown RBP14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 PCLAFQ15004 111 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 NDUFAF5Q5TEU4 345 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 SLC25A25Q6KCM7 469 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 HSDL2Q6YN16 418 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 C10orf107Q8IVU9 208 aa14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 ST13P4Q8IZP2 240 aaPredicted RBP14.82□□□□□ -0.04
CTDSP1-209ENST00000488627 FAM26EQ8N5C1 309 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms