RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 OR4A15Q8NGL6 344 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 OR10G6Q8NH81 332 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ZFP90Q8TF47 636 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 NCLNQ969V3 563 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 OR2A14Q96R47 310 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 BARD1Q99728 777 aaKnown RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 MACROD1Q9BQ69 325 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 BDH2Q9BUT1 245 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 KLHL25Q9H0H3 589 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 CHST8Q9H2A9 424 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 DDX31Q9H8H2 851 aaKnown RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PLGRKTQ9HBL7 147 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF639Q9UID6 485 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ADAM29Q9UKF5 820 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PCDHGA8Q9Y5G5 932 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PCDHGA4Q9Y5G9 962 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ARID1BQ8NFD5 2236 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 A0A0A6YYD5 115 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 TBX19O60806 448 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 C6orf47O95873 294 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 HLCSP50747 726 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 MAPK12P53778 367 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 TPD52P55327 224 aaPredicted RBP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 HNRNPKP61978 463 aaKnown RBP eCLIP11.53□□□□□ -0.56
HDAC6-230ENST00000488543 HBA1P69905 142 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 CHRNB3Q05901 458 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ZNF793Q6ZN11 406 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 CEP68Q76N32 757 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PAGE2Q7Z2X7 111 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 GALNT5Q7Z7M9 940 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 TRIM73Q86UV7 250 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 NUDT13Q86X67 352 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 PTOV1Q86YD1 416 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 SLC25A45Q8N413 288 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 VPS37AQ8NEZ2 397 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ADAMTS16Q8TE57 1224 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ZFPM2Q8WW38 1151 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 TPT1P8Q9HAU6 139 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 ATAD3AQ9NVI7 634 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 SPASTQ9UBP0 616 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 SNX7Q9UNH6 387 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 NINQ8N4C6 2090 aa11.53□□□□□ -0.56
HDAC6-230ENST00000488543 A0A0G2JN53 185 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 EVPLLA8MZ36 301 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 PTGES3LE9PB15 166 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 MITFO75030 526 aaPredicted RBP11.52□□□□□ -0.56
HDAC6-230ENST00000488543 CREG1O75629 220 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 PIAS2O75928 621 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 PRSS23O95084 383 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 KCNK5O95279 499 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 CST1P01037 141 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 SERPIND1P05546 499 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 CYP4B1P13584 511 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 UGT2B7P16662 529 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 TYRP1P17643 537 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 GSTM2P28161 218 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 ALDH4A1P30038 563 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 GRK3P35626 688 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 ALDH3A2P51648 485 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 PPP1CAP62136 330 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 LRRC74AQ0VAA2 488 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 NFATC3Q12968 1075 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 KIR2DS3Q14952 304 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 TMEM35AQ53FP2 167 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 CPZQ66K79 652 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 OR4C11Q6IEV9 310 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 BTLAQ7Z6A9 289 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 SNX29P2Q8IUI4 249 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 PNPT1Q8TCS8 783 aaKnown RBP11.52□□□□□ -0.56
HDAC6-230ENST00000488543 NETO1Q8TDF5 533 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 FAM162AQ96A26 154 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 MS4A6EQ96DS6 147 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 SLC47A1Q96FL8 570 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 QRFPRQ96P65 431 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 SLC6A16Q9GZN6 736 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 ABCG4Q9H172 646 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 ARMC7Q9H6L4 198 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 POT1Q9NUX5 634 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 VNN3Q9NY84 501 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 VPS4AQ9UN37 437 aa11.52□□□□□ -0.56
HDAC6-230ENST00000488543 WBP11Q9Y2W2 641 aaKnown RBP11.52□□□□□ -0.56
HDAC6-230ENST00000488543 TP53BP1Q12888 1972 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-230ENST00000488543 KIR2DS5A0A0G2JLQ3 304 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 A0A0G2JNG1 304 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 SH3PXD2BA1X283 911 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 G3V2T6 193 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 KIR2DS3K7RE56 304 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 CASC3O15234 703 aaKnown RBP11.52□□□□□ -0.57
HDAC6-230ENST00000488543 HS6ST1O60243 411 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 PRAMEF10O60809 474 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 DEAF1O75398 565 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-230ENST00000488543 DIRAS1O95057 198 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 RETP07949 1114 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 RAP2AP10114 183 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 DDCP20711 480 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 CTSKP43235 329 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 IL1RL1Q01638 556 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 KIR2DS5Q14953 304 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 SHBQ15464 509 aa11.52□□□□□ -0.57
HDAC6-230ENST00000488543 FAM98BQ52LJ0 330 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms