RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 GSTO1P78417 241 aa2.57□□□□□ -2
SMC4-219ENST00000487747 DNAJB7Q7Z6W7 309 aaPredicted RBP2.57□□□□□ -2
SMC4-219ENST00000487747 LAX1Q8IWV1 398 aa2.57□□□□□ -2
SMC4-219ENST00000487747 Q8N9L7 120 aa2.57□□□□□ -2
SMC4-219ENST00000487747 OR1K1Q8NGR3 316 aa2.57□□□□□ -2
SMC4-219ENST00000487747 RIT1Q92963 219 aa2.57□□□□□ -2
SMC4-219ENST00000487747 CASD1Q96PB1 797 aa2.57□□□□□ -2
SMC4-219ENST00000487747 ZNF184Q99676 751 aaPredicted RBP2.57□□□□□ -2
SMC4-219ENST00000487747 ZNF319Q9P2F9 582 aa2.57□□□□□ -2
SMC4-219ENST00000487747 GMEB2Q9UKD1 530 aa2.57□□□□□ -2
SMC4-219ENST00000487747 ETV7Q9Y603 341 aa2.57□□□□□ -2
SMC4-219ENST00000487747 PINLYPA6NC86 204 aa2.56□□□□□ -2
SMC4-219ENST00000487747 DUSP14O95147 198 aaKnown RBP2.56□□□□□ -2
SMC4-219ENST00000487747 OR6A2O95222 327 aa2.56□□□□□ -2
SMC4-219ENST00000487747 HSD17B1P14061 328 aa2.56□□□□□ -2
SMC4-219ENST00000487747 PRKCEQ02156 737 aa2.56□□□□□ -2
SMC4-219ENST00000487747 MAPRE1Q15691 268 aaKnown RBP2.56□□□□□ -2
SMC4-219ENST00000487747 FAM219BQ5XKK7 198 aa2.56□□□□□ -2
SMC4-219ENST00000487747 ZNF677Q86XU0 584 aa2.56□□□□□ -2
SMC4-219ENST00000487747 VPS33AQ96AX1 596 aa2.56□□□□□ -2
SMC4-219ENST00000487747 SNRNP40Q96DI7 357 aaKnown RBP2.56□□□□□ -2
SMC4-219ENST00000487747 PIWIL1Q96J94 861 aaKnown RBP2.56□□□□□ -2
SMC4-219ENST00000487747 VIPAS39Q9H9C1 493 aa2.56□□□□□ -2
SMC4-219ENST00000487747 PDRG1Q9NUG6 133 aa2.56□□□□□ -2
SMC4-219ENST00000487747 ANXA2P2A6NMY6 339 aa2.55□□□□□ -2
SMC4-219ENST00000487747 EFCAB7A8K855 629 aa2.55□□□□□ -2
SMC4-219ENST00000487747 RNF212BA8MTL3 300 aa2.55□□□□□ -2
SMC4-219ENST00000487747 A8MXE2 369 aa2.55□□□□□ -2
SMC4-219ENST00000487747 PDGFBP01127 241 aaPredicted RBP2.55□□□□□ -2
SMC4-219ENST00000487747 SBK2P0C263 348 aa2.55□□□□□ -2
SMC4-219ENST00000487747 LAMP1P11279 417 aa2.55□□□□□ -2
SMC4-219ENST00000487747 PDGFRAP16234 1089 aa2.55□□□□□ -2
SMC4-219ENST00000487747 TIA1P31483 386 aaKnown RBP eCLIP2.55□□□□□ -25e-7■■■■□ 23.6
SMC4-219ENST00000487747 GTF3C1Q12789 2109 aa2.55□□□□□ -2
SMC4-219ENST00000487747 LRRK1Q38SD2 2015 aa2.55□□□□□ -2
SMC4-219ENST00000487747 ZNF658BQ4V348 819 aaPredicted RBP2.55□□□□□ -2
SMC4-219ENST00000487747 ODF2Q5BJF6 829 aa2.55□□□□□ -2
SMC4-219ENST00000487747 C2orf66Q6UXQ4 117 aa2.55□□□□□ -2
SMC4-219ENST00000487747 CERS3Q8IU89 383 aa2.55□□□□□ -2
SMC4-219ENST00000487747 OR4F5Q8NH21 305 aa2.55□□□□□ -2
SMC4-219ENST00000487747 SNRNP27Q8WVK2 155 aaKnown RBP2.55□□□□□ -2
SMC4-219ENST00000487747 ELSPBP1Q96BH3 223 aa2.55□□□□□ -2
SMC4-219ENST00000487747 FER1L6-AS2Q96M78 137 aa2.55□□□□□ -2
SMC4-219ENST00000487747 CHCHD3Q9NX63 227 aaKnown RBP2.55□□□□□ -2
SMC4-219ENST00000487747 PRODH2Q9UF12 536 aa2.55□□□□□ -2
SMC4-219ENST00000487747 NEU3Q9UQ49 428 aa2.55□□□□□ -2
SMC4-219ENST00000487747 IGHV3OR16-12A0A075B7B8 117 aa2.54□□□□□ -2
SMC4-219ENST00000487747 PRAMEF12O95522 483 aa2.54□□□□□ -2
SMC4-219ENST00000487747 NR2C1P13056 603 aa2.54□□□□□ -2
SMC4-219ENST00000487747 ADRA2CP18825 462 aa2.54□□□□□ -2
SMC4-219ENST00000487747 PPP2R1BP30154 601 aa2.54□□□□□ -2
SMC4-219ENST00000487747 PSG7Q13046 419 aa2.54□□□□□ -2
SMC4-219ENST00000487747 SLC10A1Q14973 349 aa2.54□□□□□ -2
SMC4-219ENST00000487747 EMC2Q15006 297 aa2.54□□□□□ -2
SMC4-219ENST00000487747 UNC50Q53HI1 259 aa2.54□□□□□ -2
SMC4-219ENST00000487747 TGIF2LYQ8IUE0 185 aa2.54□□□□□ -2
SMC4-219ENST00000487747 IQUBQ8NA54 791 aa2.54□□□□□ -2
SMC4-219ENST00000487747 RNF149Q8NC42 400 aa2.54□□□□□ -2
SMC4-219ENST00000487747 CHDHQ8NE62 594 aaPredicted RBP2.54□□□□□ -2
SMC4-219ENST00000487747 PNPLA2Q96AD5 504 aa2.54□□□□□ -2
SMC4-219ENST00000487747 FAM122AQ96E09 287 aa2.54□□□□□ -2
SMC4-219ENST00000487747 IMMP1LQ96LU5 166 aa2.54□□□□□ -2
SMC4-219ENST00000487747 DPEP3Q9H4B8 488 aa2.54□□□□□ -2
SMC4-219ENST00000487747 TAS2R16Q9NYV7 291 aa2.54□□□□□ -2
SMC4-219ENST00000487747 A0A087WV48 116 aa2.53□□□□□ -2
SMC4-219ENST00000487747 B4DXG7 233 aa2.53□□□□□ -2
SMC4-219ENST00000487747 SH3BP5O60239 455 aa2.53□□□□□ -2
SMC4-219ENST00000487747 GRAP2O75791 330 aa2.53□□□□□ -2
SMC4-219ENST00000487747 GJB5O95377 273 aa2.53□□□□□ -2
SMC4-219ENST00000487747 IGLV1-47P01700 117 aa2.53□□□□□ -2
SMC4-219ENST00000487747 GBAP04062 536 aa2.53□□□□□ -2
SMC4-219ENST00000487747 ALOX5P09917 674 aa2.53□□□□□ -2
SMC4-219ENST00000487747 FAM58BPP0C7Q3 252 aa2.53□□□□□ -2
SMC4-219ENST00000487747 IL2RGP31785 369 aa2.53□□□□□ -2
SMC4-219ENST00000487747 EFNA3P52797 238 aa2.53□□□□□ -2
SMC4-219ENST00000487747 NAGLUP54802 743 aa2.53□□□□□ -2
SMC4-219ENST00000487747 FOLH1Q04609 750 aa2.53□□□□□ -2
SMC4-219ENST00000487747 IQCCQ4KMZ1 466 aa2.53□□□□□ -2
SMC4-219ENST00000487747 FAM91A1Q658Y4 838 aa2.53□□□□□ -2
SMC4-219ENST00000487747 PM20D1Q6GTS8 502 aa2.53□□□□□ -2
SMC4-219ENST00000487747 CAPN13Q6MZZ7 669 aaPredicted RBP2.53□□□□□ -2
SMC4-219ENST00000487747 ERN2Q76MJ5 926 aaKnown RBP2.53□□□□□ -2
SMC4-219ENST00000487747 ADCK2Q7Z695 626 aa2.53□□□□□ -2
SMC4-219ENST00000487747 ANKRD46Q86W74 232 aa2.53□□□□□ -2
SMC4-219ENST00000487747 APOBEC3FQ8IUX4 373 aaKnown RBP2.53□□□□□ -2
SMC4-219ENST00000487747 WDR49Q8IV35 697 aa2.53□□□□□ -2
SMC4-219ENST00000487747 TIGD4Q8IY51 512 aa2.53□□□□□ -2
SMC4-219ENST00000487747 OR13F1Q8NGS4 319 aa2.53□□□□□ -2
SMC4-219ENST00000487747 MRPL24Q96A35 216 aaKnown RBP2.53□□□□□ -2
SMC4-219ENST00000487747 EXOC4Q96A65 974 aa2.53□□□□□ -2
SMC4-219ENST00000487747 C16orf58Q96GQ5 468 aa2.53□□□□□ -2
SMC4-219ENST00000487747 C16orf74Q96GX8 76 aa2.53□□□□□ -2
SMC4-219ENST00000487747 WWP1Q9H0M0 922 aa2.53□□□□□ -2
SMC4-219ENST00000487747 CXXC4Q9H2H0 198 aa2.53□□□□□ -2
SMC4-219ENST00000487747 CUEDC2Q9H467 287 aa2.53□□□□□ -2
SMC4-219ENST00000487747 ELL3Q9HB65 397 aaPredicted RBP2.53□□□□□ -2
SMC4-219ENST00000487747 MRPL17Q9NRX2 175 aaKnown RBP2.53□□□□□ -2
SMC4-219ENST00000487747 IMPAD1Q9NX62 359 aa2.53□□□□□ -2
SMC4-219ENST00000487747 KLHL21Q9UJP4 597 aa2.53□□□□□ -2
SMC4-219ENST00000487747 CA5BQ9Y2D0 317 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms