RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 QPCTLQ9NXS2 382 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF629Q9UEG4 869 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-228ENST00000487354 FOXD3Q9UJU5 478 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF490Q9ULM2 529 aaPredicted RBP14.1□□□□□ -0.15
MCF2L-228ENST00000487354 STAB1Q9NY15 2570 aa14.1□□□□□ -0.15
MCF2L-228ENST00000487354 CD22P20273 847 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 NKX6-1P78426 367 aaPredicted RBP14.09□□□□□ -0.15
MCF2L-228ENST00000487354 SORDQ00796 357 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 DUSP8Q13202 625 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 ZNF460Q14592 562 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 PCBP2Q15366 365 aaKnown RBP eCLIP14.09□□□□□ -0.15
MCF2L-228ENST00000487354 DCST1Q5T197 706 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 TEDDM1Q5T9Z0 273 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 RNASEH2BQ5TBB1 312 aaKnown RBP14.09□□□□□ -0.15
MCF2L-228ENST00000487354 SLC22A10Q63ZE4 541 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 MAATS1Q7Z4T9 603 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 GPATCH11Q8N954 259 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 TTLQ8NG68 377 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 OR5L2Q8NGL0 311 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 CCT6BQ92526 530 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 CERS2Q96G23 380 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 TIMP4Q99727 224 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 TMEM79Q9BSE2 394 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 PRDM14Q9GZV8 571 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 RBSNQ9H1K0 784 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 NT5DC2Q9H857 520 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 NEUROD4Q9HD90 331 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
MCF2L-228ENST00000487354 BOKQ9UMX3 212 aaPredicted RBP14.09□□□□□ -0.15
MCF2L-228ENST00000487354 VWA7Q9Y334 891 aa14.09□□□□□ -0.15
MCF2L-228ENST00000487354 PABPN1LA6NDY0 278 aaKnown RBP14.08□□□□□ -0.16
MCF2L-228ENST00000487354 AHRRA9YTQ3 701 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 FGF17O60258 216 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 TRIM3O75382 744 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-228ENST00000487354 WDR47O94967 919 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 CLPSP04118 112 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 FBXO45P0C2W1 286 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 GNAZP19086 355 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 GSTM2P28161 218 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 AGFG1P52594 562 aaKnown RBP14.08□□□□□ -0.16
MCF2L-228ENST00000487354 KCNJ2P63252 427 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 STX4Q12846 297 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.169e-8■■□□□ 12.4
MCF2L-228ENST00000487354 POU4F3Q15319 338 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 CYP1B1Q16678 543 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 FNDC7Q5VTL7 733 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 NSUN5P2Q63ZY6 315 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 TRIM40Q6P9F5 258 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 TRMT10BQ6PF06 316 aaKnown RBP14.08□□□□□ -0.16
MCF2L-228ENST00000487354 VWA5B2Q8N398 1253 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 NUDT8Q8WV74 236 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 RHBDF1Q96CC6 855 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 SENP5Q96HI0 755 aaPredicted RBP14.08□□□□□ -0.16
MCF2L-228ENST00000487354 F2RL3Q96RI0 385 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 UBQLN3Q9H347 655 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 LYRM4Q9HD34 91 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 OARD1Q9Y530 152 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 CUBNO60494 3623 aa14.08□□□□□ -0.16
MCF2L-228ENST00000487354 HIVEP2P31629 2446 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 HEATR5AQ86XA9 2040 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 A0A088AWK7 358 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 C15orf38-AP3S2A0A0A6YYH1 394 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 MBD3L4A6NDZ8 208 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 MBD3L3A6NE82 208 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 MBD3L5A6NJ08 208 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 SCELO95171 688 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 GOSR1O95249 250 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 C1QAP02745 245 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 EPORP19235 508 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF10P21506 573 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 SOX18P35713 384 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 SERTAD2Q14140 314 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 SPANXN3Q5MJ09 141 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 SHEQ5VZ18 495 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 FAM45BPQ6NSW5 357 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 MBD3L2Q8NHZ7 208 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 FAM45AQ8TCE6 357 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 ANKRD49Q8WVL7 239 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 NTNG2Q96CW9 530 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 WDR34Q96EX3 536 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 RUNDC3BQ96NL0 473 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 ZNF395Q9H8N7 513 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 ADAM21Q9UKJ8 722 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 CORO1CQ9ULV4 474 aaPredicted RBP14.07□□□□□ -0.16
MCF2L-228ENST00000487354 PSAT1Q9Y617 370 aa14.07□□□□□ -0.16
MCF2L-228ENST00000487354 RTCAO00442 366 aaKnown RBP14.06□□□□□ -0.16
MCF2L-228ENST00000487354 TAPBPO15533 448 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 TNNI3P19429 210 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 ATP5A1P25705 553 aaKnown RBP14.06□□□□□ -0.16
MCF2L-228ENST00000487354 STT3AP46977 705 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 HNMTP50135 292 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 TSNQ15631 228 aaKnown RBP14.06□□□□□ -0.16
MCF2L-228ENST00000487354 Q5PR19 223 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 BICRALQ6AI39 1079 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 VASNQ6EMK4 673 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
MCF2L-228ENST00000487354 OR4N5Q8IXE1 308 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 PPIL6Q8IXY8 311 aa14.06□□□□□ -0.16
MCF2L-228ENST00000487354 RASGEF1CQ8N431 466 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms