RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 PADI4Q9UM07 663 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 FAF1Q9UNN5 650 aaPredicted RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PLCL2Q9UPR0 1127 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SAMD4AQ9UPU9 718 aaKnown RBP6.67□□□□□ -1.34
SF3A3-206ENST00000487062 DTNAQ9Y4J8 743 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ATG4BQ9Y4P1 393 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 LRRC42Q9Y546 428 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 SNX8Q9Y5X2 465 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF780BQ9Y6R6 833 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 RNF215Q9Y6U7 377 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 PRUNE2Q8WUY3 3088 aa6.67□□□□□ -1.34
SF3A3-206ENST00000487062 GOLGA4Q13439 2230 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ADAMTS9Q9P2N4 1935 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 UNC80Q8N2C7 3258 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 IGHV1OR21-1A0A087WYE8 117 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 RNF103-CHMP3A0A140T963 221 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM247A6NEH6 219 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 MYO1GB0I1T2 1018 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ERVH48-1M5A8F1 160 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 GALR3O60755 368 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 DEAF1O75398 565 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TIPRLO75663 272 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ZBTB11O95625 1053 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SERPINA1P01009 418 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CFIP05156 583 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ACADSP16219 412 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 PNLIPP16233 465 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ATP6V1C1P21283 382 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 PEX2P28328 305 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 MAGEA8P43361 318 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 HSPA13P48723 471 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CCT3P49368 545 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CCT8P50990 548 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 NCBP2P52298 156 aaKnown RBP eCLIP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 DSTNP60981 165 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TXNL4AP83876 142 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 BNC1Q01954 994 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TNFRSF17Q02223 184 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 HSPB3Q12988 150 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SRSF5Q13243 272 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SLC14A1Q13336 389 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 GAB1Q13480 694 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 NR1D2Q14995 579 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 PRSS53Q2L4Q9 553 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF630Q2M218 657 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF528Q3MIS6 628 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CMPK2Q5EBM0 449 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMTC4Q5T4D3 741 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 GCNT6Q5T4J0 391 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 GARNL3Q5VVW2 1013 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 LPCAT4Q643R3 524 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM214Q6NUQ4 689 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 IZUMO2Q6UXV1 221 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM64Q6YI46 380 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 FAM92BQ6ZTR7 304 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF551Q7Z340 670 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 C6orf120Q7Z4R8 191 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ZNF438Q7Z4V0 828 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 PTOV1Q86YD1 416 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SLC35F3Q8IY50 421 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 MAML2Q8IZL2 1156 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 LILRA2Q8N149 483 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SLC25A45Q8N413 288 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 DNAJC22Q8N4W6 341 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM102Q8N9M5 508 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TTC29Q8NA56 475 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ICA1LQ8NDH6 482 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 OR4K14Q8NGD5 310 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 PSMA8Q8TAA3 256 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 FBXO30Q8TB52 745 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 NETO1Q8TDF5 533 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ADAMTS18Q8TE60 1221 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 EME1Q96AY2 570 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 NEURL3Q96EH8 262 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SLC47A1Q96FL8 570 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CENPNQ96H22 339 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 AMDHD1Q96NU7 426 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TGM7Q96PF1 710 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 DPH2Q9BQC3 489 aaPredicted RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 BDH2Q9BUT1 245 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 C9orf16Q9BUW7 83 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CHST8Q9H2A9 424 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 GLIPR2Q9H4G4 154 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM38AQ9H6F2 299 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 EPS8L2Q9H6S3 715 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 MAGIXQ9H6Y5 334 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CXorf36Q9H7Y0 433 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SYNPO2LQ9H987 977 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CLK4Q9HAZ1 481 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 C3orf14Q9HBI5 128 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 C8orf4Q9NR00 106 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 TMEM74BQ9NUR3 256 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 IRAK4Q9NWZ3 460 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 SOHLH2Q9NX45 425 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 C5AR2Q9P296 337 aa6.66□□□□□ -1.34
SF3A3-206ENST00000487062 CNOT11Q9UKZ1 510 aaKnown RBP6.66□□□□□ -1.34
SF3A3-206ENST00000487062 DAPP1Q9UN19 280 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms