RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 KIAA0513O60268 411 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SEC22BO75396 215 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 TXNDC12O95881 172 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SLC4A1P02730 911 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ALPPP05187 535 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ALPPL2P10696 532 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SELEP16581 610 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 FCARP24071 287 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 RPL9P32969 192 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ZFP36L2P47974 494 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 PITPNBP48739 271 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 CLK1P49759 484 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 LUMP51884 338 aaPredicted RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 PKN2Q16513 984 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 WSCD2Q2TBF2 565 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 EPC2Q52LR7 807 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 C1orf189Q5VU69 101 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 NKAIN2Q5VXU1 208 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF613Q6PF04 617 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 CNSTQ6PJW8 725 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF730Q6ZMV8 503 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 WDR49Q8IV35 697 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 CCNYQ8ND76 341 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 OR52E1Q8NGJ3 308 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SPPL2AQ8TCT8 520 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 TCP11Q8WWU5 503 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 GTF3AQ92664 365 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 C11orf52Q96A22 123 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 MRPL53Q96EL3 112 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 MOCOSQ96EN8 888 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 RPGRIP1Q96KN7 1286 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 CXorf58Q96LI9 332 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 PRICKLE1Q96MT3 831 aaPredicted RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 GPR137Q96N19 417 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ALKBH3Q96Q83 286 aaPredicted RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SPAG8Q99932 426 aaPredicted RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 TRIM51Q9BSJ1 452 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SYT11Q9BT88 431 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 FUNDC2Q9BWH2 189 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 SLC26A1Q9H2B4 701 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 PARLQ9H300 379 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 PLEKHA3Q9HB20 300 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 NMUR1Q9HB89 426 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 TECRQ9NZ01 308 aaKnown RBP2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 KCNN3Q9UGI6 736 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 ODF2LQ9ULJ1 636 aa2.94□□□□□ -1.94
SNRNP27-204ENST00000487029 IGHV4-30-2A0A087WSY4 118 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 RNF103-CHMP3A0A140T963 221 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 NDUFAF8A1L188 74 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 ARHGAP42A6NI28 874 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 YJEFN3A6XGL0 299 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 TMCO5BA8MYB1 307 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 DCXO43602 365 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 NME2P1O60361 137 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 CSO75390 466 aaKnown RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 CRLF1O75462 422 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 OR6A2O95222 327 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 CCDC192P0DO97 292 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 PCP11498 1178 aaKnown RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 DPEP1P16444 411 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 IL10P22301 178 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 MARCKSP29966 332 aaPredicted RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 TNFRSF4P43489 277 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 RIGQ13278 110 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 NFATC2Q13469 925 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 PDK1Q15118 436 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 MS4A18Q3C1V0 323 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 PARP10Q53GL7 1025 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 CCDC92Q53HC0 331 aaPredicted RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 C2CD6Q53TS8 623 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 RTL6Q6ICC9 239 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 NEPROQ6NW34 567 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 FAAP20Q6NZ36 180 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF497Q6ZNH5 498 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 C1orf186Q6ZWK4 172 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 ADAMTSL2Q86TH1 951 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 TBC1D10CQ8IV04 446 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 HDDC3Q8N4P3 179 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 LEMD2Q8NC56 503 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 PRSS33Q8NF86 280 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 MRPL24Q96A35 216 aaKnown RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 RAB39BQ96DA2 213 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 AGAP3Q96P47 875 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 ZNF577Q9BSK1 485 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 DCTN5Q9BTE1 182 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 XPO4Q9C0E2 1151 aaKnown RBP2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 IL1RAPQ9NPH3 570 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 GDF3Q9NR23 364 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 NUDT4Q9NZJ9 180 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 NDUFA13Q9P0J0 144 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 VPS54Q9P1Q0 977 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 FAM153AQ9UHL3 310 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 DNPEPQ9ULA0 475 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 CCPG1Q9ULG6 757 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 RNF215Q9Y6U7 377 aa2.93□□□□□ -1.94
SNRNP27-204ENST00000487029 FGD5Q6ZNL6 1462 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 BICDL2A1A5D9 508 aa2.92□□□□□ -1.94
SNRNP27-204ENST00000487029 SH3PXD2BA1X283 911 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms