RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 INSM2Q96T92 566 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 DDX31Q9H8H2 851 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 NMNAT1Q9HAN9 279 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 AMBNQ9NP70 447 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 ACSS1Q9NUB1 689 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 IMPAD1Q9NX62 359 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 SELENONQ9NZV5 590 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 DUSP12Q9UNI6 340 aa17.08■□□□□ 0.32
PDLIM7-207ENST00000486828 LCMT2O60294 686 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 PDE9AO76083 593 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 OCM2P0CE71 109 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 OCMP0CE72 109 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 ACP5P13686 325 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 POU2F1P14859 743 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 WASP42768 502 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 LIM2P55344 173 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 TRA2BP62995 288 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 PTGES3Q15185 160 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 ZNF770Q6IQ21 691 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 KLHL17Q6TDP4 642 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 TAGAPQ8N103 731 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 HDDC3Q8N4P3 179 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 GPR32P1Q8NGA4 272 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 PSMA8Q8TAA3 256 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 ALOXE3Q9BYJ1 711 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 FBXO8Q9NRD0 319 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 TEX10Q9NXF1 929 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 RHCGQ9UBD6 479 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 SERGEFQ9UGK8 458 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 PMF1-BGLAPU3KQ54 211 aa17.07■□□□□ 0.32
PDLIM7-207ENST00000486828 EFCAB9A8MZ26 197 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 M0R082 166 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 HMGN4O00479 90 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 FFAR1O14842 300 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 SH3BP5O60239 455 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 CLEC3AO75596 197 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 ADH1BP00325 375 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 GASTP01350 101 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 C5AR1P21730 350 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 LIPAP38571 399 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 EIF2DP41214 584 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 NUDT6P53370 316 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 CDC42P60953 191 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 PRDX1Q06830 199 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 MLC1Q15049 377 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 MAPK11Q15759 364 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 MLF2Q15773 248 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 OR4C11Q6IEV9 310 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 SLC44A2Q8IWA5 706 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 RAB8BQ92930 207 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 CAMK1GQ96NX5 476 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 BTBD2Q9BX70 525 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 OSGEPL1Q9H4B0 414 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 PHPT1Q9NRX4 125 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 GPR83Q9NYM4 423 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 TAS2R7Q9NYW3 318 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 FTSJ1Q9UET6 329 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 PNMA8BQ9ULN7 279 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.06■□□□□ 0.324e-7■■■■■ 30.8
PDLIM7-207ENST00000486828 TRPM6Q9BX84 2022 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 A0A0A6YYD5 115 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 A0A1W2PPC1 479 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 ZAR1LA6NP61 321 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 FUCA1P04066 466 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 STSP08842 583 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 CTSKP43235 329 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 ATP1A4Q13733 1029 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 ENPP2Q13822 863 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 FGL2Q14314 439 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 SYT16Q17RD7 645 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 TIGD6Q17RP2 521 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 TMEM236Q5W0B7 351 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 ADCK2Q7Z695 626 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 PLD3Q8IV08 490 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 STX19Q8N4C7 294 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 AMER3Q8N944 861 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 TP53I13Q8NBR0 393 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 OR6Q1Q8NGQ2 317 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 CREB3L4Q8TEY5 395 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 SNRNP27Q8WVK2 155 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 COL21A1Q96P44 957 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 OSGIN1Q9UJX0 560 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 ZFR2Q9UPR6 939 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 SNX11Q9Y5W9 270 aa17.06■□□□□ 0.32
PDLIM7-207ENST00000486828 IGKV1-8A0A0C4DH67 115 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 A0A1W2PP55 124 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 DRD2P14416 443 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 CCT3P49368 545 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 RAB28P51157 221 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 CRISP1P54107 249 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 BTLAQ7Z6A9 289 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 TTLQ8NG68 377 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 OR2A1Q8NGT9 310 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 UCN3Q969E3 161 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 ZHX1-C8orf76Q96EF9 292 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 TEFMQ96QE5 360 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 TIMM29Q9BSF4 260 aa17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 RSPO3Q9BXY4 272 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-207ENST00000486828 SLIRPQ9GZT3 109 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms