RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 KLF13Q9Y2Y9 288 aaPredicted RBP12□□□□□ -0.49
CHMP3-208ENST00000486404 ATG4BQ9Y4P1 393 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 POLEQ07864 2286 aa12□□□□□ -0.49
CHMP3-208ENST00000486404 DOPEY1Q5JWR5 2465 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 A0A1B0GUH1 482 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 A8MVJ9 347 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 LRRTM2O43300 516 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TMPRSS11DO60235 418 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 GLRA3O75311 464 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 PRKRAO75569 313 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 OR2J2O76002 312 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 SUPT7LO94864 414 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 ETHE1O95571 254 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 AIFM1O95831 613 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 LDLRP01130 860 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 GBAP04062 536 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 ALOX15P16050 662 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TSPAN8P19075 237 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 ATP5F1P24539 256 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 MST1P26927 711 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TNFRSF8P28908 595 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 BSGP35613 385 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 SLCO1A2P46721 670 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 GPR143P51810 404 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 CDH13P55290 713 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 SRSF11Q05519 484 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 RASA2Q15283 850 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 C1QL3Q5VWW1 255 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 C18orf63Q68DL7 685 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 FJX1Q86VR8 437 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 SLC22A9Q8IVM8 553 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 OR4N5Q8IXE1 308 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 GPALPP1Q8IXQ4 340 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 OR5L2Q8NGL0 311 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TRPC4APQ8TEL6 797 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 PTPMT1Q8WUK0 201 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 ANKRD9Q96BM1 317 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 RBM18Q96H35 190 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 FRMD6Q96NE9 622 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TMEM237Q96Q45 408 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 CNPPD1Q9BV87 410 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 C1QTNF3Q9BXJ4 246 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TSPAN10Q9H1Z9 355 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 EPB41L4BQ9H329 900 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 DDX31Q9H8H2 851 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 ZBTB26Q9HCK0 441 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TIMMDC1Q9NPL8 285 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 HPF1Q9NWY4 346 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 PSD3Q9NYI0 1048 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 TMEM216Q9P0N5 145 aa11.99□□□□□ -0.49
CHMP3-208ENST00000486404 SUCOQ9UBS9 1254 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 PLEKHB1Q9UF11 243 aaPredicted RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 YARS2Q9Y2Z4 477 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 UTP20O75691 2785 aaKnown RBP11.99□□□□□ -0.49
CHMP3-208ENST00000486404 CROCCQ5TZA2 2017 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 TRGV8A0A0C4DH27 118 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 CCDC151A5D8V7 595 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 ASPDHA6ND91 283 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 GLOD5A6NK44 160 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 NPIPA5E9PKD4 350 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 WWP2O00308 870 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 TFECO14948 347 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 KRT6AP02538 564 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 KRT6BP04259 564 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 SBK3P0C264 359 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 RNF224P0DH78 156 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 MYL2P10916 166 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 HMOX2P30519 316 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 KRT6CP48668 564 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 MEOX1P50221 254 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 MAPK12P53778 367 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 IGLV3-21P80748 117 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 CLCQ05315 142 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 BIKQ13323 160 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 CCNYL2Q5T2Q4 361 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 LETMD1Q6P1Q0 360 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 GPRIN3Q6ZVF9 776 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 ARMC10Q8N2F6 343 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 CDYL2Q8N8U2 506 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 POGLUT1Q8NBL1 392 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 GAL3ST4Q96RP7 486 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF382Q96SR6 550 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 ZNF717Q9BY31 904 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 MRPL1Q9BYD6 325 aaKnown RBP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 TRIM45Q9H8W5 580 aaPredicted RBP11.98□□□□□ -0.49
CHMP3-208ENST00000486404 NMRK1Q9NWW6 199 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 MYOTQ9UBF9 498 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 SH3BGRL2Q9UJC5 107 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 NPIPA1Q9UND3 350 aa11.98□□□□□ -0.49
CHMP3-208ENST00000486404 KLRC4-KLRK1H3BQV0 150 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 PROM1O43490 865 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 PRKNO60260 465 aaPredicted RBP11.97□□□□□ -0.49
CHMP3-208ENST00000486404 DLX3O60479 287 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 GUCY1B2O75343 617 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 OR4F21O95013 312 aa11.97□□□□□ -0.49
CHMP3-208ENST00000486404 GPR75O95800 540 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms