RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ICAM2P13598 275 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 GFAPP14136 432 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 NCF1P14598 390 aaPredicted RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 IMPDH1P20839 514 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 PSMB5P28074 263 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 AGTR2P50052 363 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 ASPHQ12797 758 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 RPA4Q13156 261 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 RCN2Q14257 317 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 GRB7Q14451 532 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 SETDB1Q15047 1291 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 MEP1AQ16819 746 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 PFKFB4Q16877 469 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 C18orf21Q32NC0 220 aaPredicted RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 FLYWCH1Q4VC44 716 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 FBXO48Q5FWF7 155 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 ZC3H12BQ5HYM0 836 aaKnown RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 ZNF678Q5SXM1 525 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 PLAG1Q6DJT9 500 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 RTL6Q6ICC9 239 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 MBOAT1Q6ZNC8 495 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 FRA10AC1Q70Z53 315 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 UBE2R2Q712K3 238 aaPredicted RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 CCNYL1Q8N7R7 359 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 FAM98AQ8NCA5 519 aaKnown RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 PDPRQ8NCN5 879 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 OR5M9Q8NGP3 310 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 OR5M3Q8NGP4 307 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 OR10Q1Q8NGQ4 319 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 SREK1Q8WXA9 508 aaKnown RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 THOC1Q96FV9 657 aaKnown RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 VN1R1Q9GZP7 353 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 NSRP1Q9H0G5 558 aaKnown RBP9.16□□□□□ -0.94
SND1-213ENST00000486037 GSTO2Q9H4Y5 243 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 PLSCR2Q9NRY7 297 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 C14orf105Q9NVL8 296 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 THAP1Q9NVV9 213 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 CD274Q9NZQ7 290 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 TMCO1Q9UM00 188 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 EDARQ9UNE0 448 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 PDE10AQ9Y233 779 aa9.16□□□□□ -0.94
SND1-213ENST00000486037 KRT87PA6NCN2 255 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 ARHGEF33A8MVX0 844 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 FOXS1O43638 330 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 SNX3O60493 162 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 PSIP1O75475 530 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 HSPA4LO95757 839 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 GUCA1CO95843 209 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 RPS17P08708 135 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 ENO2P09104 434 aaPredicted RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 C8orf89P0DMQ9 161 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 GLI4P10075 376 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 BDKRB1P46663 353 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 ZFP36L2P47974 494 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 ALDH18A1P54886 795 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 HERVK_113P63132 956 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 KRTAP1-1Q07627 177 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 SP140Q13342 867 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 PRTGQ2VWP7 1150 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 CCSMST1Q4G0I0 132 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 ARL13AQ5H913 290 aaPredicted RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 FAM219BQ5XKK7 198 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 HMBOX1Q6NT76 420 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 FRMD7Q6ZUT3 714 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 CPEB2Q7Z5Q1 589 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 WDR53Q7Z5U6 358 aaPredicted RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 ZNF781Q8N8C0 355 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 CFAP61Q8NHU2 1237 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 RFWD2Q8NHY2 731 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 ZNF483Q8TF39 744 aaPredicted RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 SKA2Q8WVK7 121 aaPredicted RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 ESAMQ96AP7 390 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 NSUN5Q96P11 429 aaKnown RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 TTYH2Q9BSA4 534 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 TMEM79Q9BSE2 394 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 C1QTNF3Q9BXJ4 246 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 ERVK-6Q9BXR3 956 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 PARVBQ9HBI1 364 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 PNPOQ9NVS9 261 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 BEX4Q9NWD9 120 aaPredicted RBP9.15□□□□□ -0.94
SND1-213ENST00000486037 POLG2Q9UHN1 485 aa9.15□□□□□ -0.94
SND1-213ENST00000486037 NPIPA2E9PIF3 369 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 NPIPA3F8WFD2 350 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 UBFD1O14562 309 aaKnown RBP9.14□□□□□ -0.95
SND1-213ENST00000486037 SUPT7LO94864 414 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 TGDSO95455 350 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 S100BP04271 92 aaPredicted RBP9.14□□□□□ -0.95
SND1-213ENST00000486037 TSPAN8P19075 237 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 UQCRC1P31930 480 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 SERPINB5P36952 375 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 CDH13P55290 713 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 AP2B1P63010 937 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 CDKL1Q00532 357 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 DAZAP2Q15038 168 aaPredicted RBP9.14□□□□□ -0.95
SND1-213ENST00000486037 MUM1Q2TAK8 710 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 HKDC1Q2TB90 917 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 GXYLT1Q4G148 440 aa9.14□□□□□ -0.95
SND1-213ENST00000486037 CFAP157Q5JU67 520 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms