RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	MAGEB18	Q96M61	343 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	ALOXE3	Q9BYJ1	711 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	ING2	Q9H160	280 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	ZNF160	Q9HCG1	818 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	PNO1	Q9NRX1	252 aa	Known RBP	12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	TEX10	Q9NXF1	929 aa	Predicted RBP	12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	PSME2	Q9UL46	239 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	DLGAP4	Q9Y2H0	992 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	TMED5	Q9Y3A6	229 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	KCNMB2	Q9Y691	235 aa		12.98	□□□□□ -0.33
SCAP-211	ENST00000485967	LOC102723996	A0A087X1L8	192 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	IGHV3-20	A0A0C4DH32	117 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	MYOCOS	A0A1B0GUC4	107 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	C1orf226	A1L170	272 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	TRPC5OS	A6NMA1	111 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967		A8MUA0	341 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	NPIPB8	E9PQR5	432 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	LSM1	O15116	133 aa	Known RBP	12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	PGRMC2	O15173	223 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	HDAC3	O15379	428 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	PRKRA	O75569	313 aa	Known RBP	12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	SEC24D	O94855	1032 aa	Predicted RBP	12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	HP	P00738	406 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	ITGB2	P05107	769 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	ICAM2	P13598	275 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	PIK3R1	P27986	724 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	MAPK1	P28482	360 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	GSTM5	P46439	218 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	CCL11	P51671	97 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	EFNA3	P52797	238 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	RPL38	P63173	70 aa	Known RBP	12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	ID2	Q02363	134 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	C2orf80	Q0P641	193 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	CHAF1B	Q13112	559 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	BIK	Q13323	160 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	HEPACAM	Q14CZ8	416 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	DCAF10	Q5QP82	559 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	IRAK1BP1	Q5VVH5	260 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	OR52E8	Q6IFG1	317 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	SCUBE1	Q8IWY4	988 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	OR4N5	Q8IXE1	308 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	TMEM132C	Q8N3T6	1108 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	PIWIL2	Q8TC59	973 aa	Known RBP	12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	C3orf30	Q96M34	536 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	LPAR4	Q99677	370 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	MESP1	Q9BRJ9	268 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	TUBB6	Q9BUF5	446 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	NUF2	Q9BZD4	464 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	ZNF700	Q9H0M5	742 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	G3BP2	Q9UN86	482 aa	Known RBP	12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	PCDHA9	Q9Y5H5	950 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	RELN	P78509	3460 aa		12.97	□□□□□ -0.33
SCAP-211	ENST00000485967	NBAS	A2RRP1	2371 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	SPEN	Q96T58	3664 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	IGKV3D-11	A0A0A0MRZ8	115 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	IGHV1-45	A0A0A0MS14	117 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	TCRBV16S1A1N1	A0A5B0	115 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967		A6NL46	340 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	PYCARD-AS1	I3L0S3	204 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	FGF17	O60258	216 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	VPS4B	O75351	444 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	GPR75	O95800	540 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	JUN	P05412	331 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	IL3	P08700	152 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	DRD2	P14416	443 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	HK2	P52789	917 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	FOLH1	Q04609	750 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	ZNF763	Q0D2J5	394 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	AIMP2	Q13155	320 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	MAD2L1	Q13257	205 aa	Predicted RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	KIAA0040	Q15053	153 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	RFTN2	Q52LD8	501 aa	Predicted RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	XKR7	Q5GH72	579 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	C6orf136	Q5SQH8	315 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	PAPD4	Q6PIY7	484 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	APLF	Q8IW19	511 aa	Predicted RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	WDR75	Q8IWA0	830 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	PARP9	Q8IXQ6	854 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	FNDC5	Q8NAU1	212 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	OR4K14	Q8NGD5	310 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	UCN3	Q969E3	161 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	C11orf24	Q96F05	449 aa	Predicted RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	RBM18	Q96H35	190 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	C7orf26	Q96N11	449 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	DGAT2	Q96PD7	388 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	GIMAP2	Q9UG22	337 aa		12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	EIF3L	Q9Y262	564 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	WBP11	Q9Y2W2	641 aa	Known RBP	12.96	□□□□□ -0.33
SCAP-211	ENST00000485967	WASHC1	A8K0Z3	465 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	MASP2	O00187	686 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	DYRK3	O43781	588 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	SLC28A2	O43868	658 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	OR10H2	O60403	315 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	ERAL1	O75616	437 aa	Known RBP	12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	COX6A1	P12074	109 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	COX7A2	P14406	83 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	ITGA3	P26006	1051 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	XK	P51811	444 aa		12.95	□□□□□ -0.34
SCAP-211	ENST00000485967	AP2B1	P63010	937 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms