RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ATG4BQ9Y4P1 393 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 ASB4Q9Y574 426 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 PCDHGB7Q9Y5F8 929 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 HS3ST3B1Q9Y662 390 aa7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MRPS18BQ9Y676 258 aaKnown RBP7.77□□□□□ -1.17
SF3A1-208ENST00000485618 MGAQ8IWI9 3026 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 A0A1W2PQ72 361 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 A0A1W2PR48 441 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 FAM227AF5H4B4 570 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 TMPRSS11DO60235 418 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 PEX11AO75192 247 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 JRKO75564 520 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SLITRK5O94991 958 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ETHE1O95571 254 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 B3GALT4O96024 378 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 GBAP04062 536 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SERPINA7P05543 415 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 FAM87AP0C7U9 286 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SLC35E2P0CK97 266 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 PRPS1L1P21108 318 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ITGA3P26006 1051 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 TPP2P29144 1249 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 GALNSP34059 522 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 HPCAL1P37235 193 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ALDH9A1P49189 494 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 HTR6P50406 440 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 IRX1P78414 480 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 EMX2Q04743 252 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 C2orf80Q0P641 193 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SRSF6Q13247 344 aaKnown RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 IL10RAQ13651 578 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ATP1A4Q13733 1029 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 RPS6KA2Q15349 733 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ELAVL1Q15717 326 aaKnown RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 PDCD2Q16342 344 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 UGT3A2Q3SY77 523 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 GALNTL6Q49A17 601 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SFT2D3Q587I9 215 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 AGAP7PQ5VUJ5 663 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 PLAG1Q6DJT9 500 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 FAAH2Q6GMR7 532 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ATG14Q6ZNE5 492 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 RGS9BPQ6ZS82 235 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ACAD11Q709F0 780 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SPATA19Q7Z5L4 167 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ANKRD37Q7Z713 158 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SCUBE1Q8IWY4 988 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ST13P4Q8IZP2 240 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 DTWD1Q8N5C7 304 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 EXD3Q8N9H8 876 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 MORN4Q8NDC4 146 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 VPS37AQ8NEZ2 397 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 OR11G2Q8NGC1 345 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ADAMTS17Q8TE56 1095 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 CKAP2Q8WWK9 683 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 EXTL1Q92935 676 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 TM4SF18Q96CE8 201 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 MTERF3Q96E29 417 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 APIPQ96GX9 242 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 AGAP4Q96P64 663 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ZBTB18Q99592 522 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 SORBS1Q9BX66 1292 aaKnown RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 RBCK1Q9BYM8 510 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 AICDAQ9GZX7 198 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 LHPPQ9H008 270 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 MYNNQ9NPC7 610 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ADAP2Q9NPF8 381 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 NOP53Q9NZM5 478 aaKnown RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ABI3Q9P2A4 366 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 TUBD1Q9UJT1 453 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 ENTPD4Q9Y227 616 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 DLGAP4Q9Y2H0 992 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 PCDHA9Q9Y5H5 950 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 KCNMB2Q9Y691 235 aa7.76□□□□□ -1.17
SF3A1-208ENST00000485618 USP9XQ93008 2570 aaPredicted RBP7.76□□□□□ -1.17
SF3A1-208ENST00000485618 MYO18BQ8IUG5 2567 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 PIEZO2Q9H5I5 2752 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 IGHV1-45A0A0A0MS14 117 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 GOLGA8QA0A0J9YX86 632 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 TCRBV16S1A1N1A0A5B0 115 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 GOLGA8OA6NCC3 632 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ARGFXA6NJG6 315 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 GOLGA8NF8WBI6 632 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SOCS6O14544 535 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 LSM1O15116 133 aaKnown RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 ITM2AO43736 263 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 CNOT3O75175 753 aaKnown RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 SKAP2O75563 359 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 BCAS2O75934 225 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 VIMP08670 466 aaKnown RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 TROVE2P10155 538 aaKnown RBP eCLIP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 KITP10721 976 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 PORP16435 677 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 LBPP18428 481 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 WT1P19544 449 aaPredicted RBP7.75□□□□□ -1.17
SF3A1-208ENST00000485618 DDCP20711 480 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 MAOAP21397 527 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 NTSP30990 170 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 STT3AP46977 705 aa7.75□□□□□ -1.17
SF3A1-208ENST00000485618 CCL11P51671 97 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms