RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SENP5Q96HI0 755 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-205ENST00000485397 ATOH8Q96SQ7 321 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 GRHL1Q9NZI5 618 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 NUDT4Q9NZJ9 180 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 RNF14Q9UBS8 474 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 COPS7AQ9UBW8 275 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 ATG4BQ9Y4P1 393 aa17.78■□□□□ 0.44
COL27A1-205ENST00000485397 A0A1B0GVC2 190 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 OR14I1A6ND48 311 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 FAM187AA6NFU0 413 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 SUPT3HB4E1H0 165 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 UBXN8O00124 270 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 HRKO00198 91 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 BCKDKO14874 412 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 SUPT3HO75486 399 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 P04436 131 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 SLC35E2BP0CK96 405 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 SPRP35270 261 aaPredicted RBP17.77■□□□□ 0.44
COL27A1-205ENST00000485397 PIGAP37287 484 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 STT3AP46977 705 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 IGLV3-21P80748 117 aaPredicted RBP17.77■□□□□ 0.44
COL27A1-205ENST00000485397 SLAMF1Q13291 335 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 DDX39BQ13838 428 aaKnown RBP17.77■□□□□ 0.44
COL27A1-205ENST00000485397 MPEG1Q2M385 716 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 DEPDC1Q5TB30 811 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 GRTP1Q5TC63 336 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 KHDRBS2Q5VWX1 349 aaKnown RBP17.77■□□□□ 0.44
COL27A1-205ENST00000485397 RTL6Q6ICC9 239 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 OR4C11Q6IEV9 310 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 RAPH1Q70E73 1250 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 C9orf40Q8IXQ3 194 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 PPM1NQ8N819 430 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 OR10Q1Q8NGQ4 319 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 CMTM7Q96FZ5 175 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 DGAT2Q96PD7 388 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 TTYH2Q9BSA4 534 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 IGSF5Q9NSI5 407 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 OPTCQ9UBM4 332 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 FAM215AQ9Y5M1 114 aa17.77■□□□□ 0.44
COL27A1-205ENST00000485397 PHF3Q92576 2039 aaKnown RBP17.77■□□□□ 0.43
COL27A1-205ENST00000485397 ADGRG4Q8IZF6 3080 aa17.77■□□□□ 0.43
COL27A1-205ENST00000485397 FOXO6A8MYZ6 492 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 K7EPI3 171 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 RAD51CO43502 376 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 PRKRAO75569 313 aaKnown RBP17.76■□□□□ 0.43
COL27A1-205ENST00000485397 NADKO95544 446 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-205ENST00000485397 IGKV3-11P04433 115 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 HOXD4P09016 255 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-205ENST00000485397 GLI4P10075 376 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 COX7A2P14406 83 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 SLC10A1Q14973 349 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 SLMAPQ14BN4 828 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 HYAL4Q2M3T9 481 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 ZNF791Q3KP31 576 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-205ENST00000485397 KBTBD12Q3ZCT8 623 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 C18orf63Q68DL7 685 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 LYPD8Q6UX82 237 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 B3GNT6Q6ZMB0 384 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 NUBPLQ8TB37 319 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 LDAHQ9H6V9 325 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 RPF2Q9H7B2 306 aaKnown RBP17.76■□□□□ 0.43
COL27A1-205ENST00000485397 NMRAL1Q9HBL8 299 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 ACAD8Q9UKU7 415 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 HIVEP1P15822 2718 aa17.76■□□□□ 0.43
COL27A1-205ENST00000485397 C2CD3Q4AC94 2353 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 FIGNL2A6NMB9 653 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 WASHC1A8K0Z3 465 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 AQP7O14520 342 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 KERAO60938 352 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 MAN2A2P49641 1150 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 HNRNPH2P55795 449 aaKnown RBP17.75■□□□□ 0.43
COL27A1-205ENST00000485397 FOLH1Q04609 750 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 PCDH1Q08174 1060 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 GRHL2Q6ISB3 625 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 ADGRD1Q6QNK2 874 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 SPNS3Q6ZMD2 512 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 LIX1LQ8IVB5 337 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 TEX9Q8N6V9 391 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 HUS1BQ8NHY5 278 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 UBTD2Q8WUN7 234 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 NXNL1Q96CM4 212 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 RBM18Q96H35 190 aaKnown RBP17.75■□□□□ 0.43
COL27A1-205ENST00000485397 ZNF559Q9BR84 538 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 CNPPD1Q9BV87 410 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 SH2D2AQ9NP31 389 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.75■□□□□ 0.43
COL27A1-205ENST00000485397 ANKRD17O75179 2603 aaKnown RBP17.75■□□□□ 0.43
COL27A1-205ENST00000485397 MED13LQ71F56 2210 aa17.75■□□□□ 0.43
COL27A1-205ENST00000485397 TACC2O95359 2948 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 A0A0G2JNJ9 132 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 PLPP1O14494 284 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 KLK8O60259 260 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 GSTA2P09210 222 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 LTA4HP09960 611 aaKnown RBP17.74■□□□□ 0.43
COL27A1-205ENST00000485397 MTHFD2P13995 350 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 SERPINB1P30740 379 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 ADH7P40394 386 aa17.74■□□□□ 0.43
COL27A1-205ENST00000485397 ZFP36L2P47974 494 aaKnown RBP17.74■□□□□ 0.43
COL27A1-205ENST00000485397 RAP1GDS1P52306 607 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms