RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 FAM219BQ5XKK7 198 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 KANK2Q63ZY3 851 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 OR52E8Q6IFG1 317 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 Q6ZS92 163 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 CLNKQ7Z7G1 428 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 CLYBLQ8N0X4 340 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 APCDD1LQ8NCL9 501 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 MORN4Q8NDC4 146 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 PTPMT1Q8WUK0 201 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-213ENST00000485080 HAS2Q92819 552 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 TM4SF18Q96CE8 201 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 ZNF354BQ96LW1 612 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 PELOQ9BRX2 385 aaKnown RBP16.61■□□□□ 0.25
SREBF1-213ENST00000485080 VIPAS39Q9H9C1 493 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 KCNK13Q9HB14 408 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 PTGFRNQ9P2B2 879 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 WBP11Q9Y2W2 641 aaKnown RBP16.61■□□□□ 0.25
SREBF1-213ENST00000485080 TRAF6Q9Y4K3 522 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 PCDHA9Q9Y5H5 950 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 CPAMD8Q8IZJ3 1885 aa16.61■□□□□ 0.25
SREBF1-213ENST00000485080 SERPINE1P05121 402 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 CHRNGP07510 517 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 GRK2P25098 689 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 ARRB2P32121 409 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 TAS2R50P59544 299 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 RAE1P78406 368 aaKnown RBP16.6■□□□□ 0.25
SREBF1-213ENST00000485080 FOLH1Q04609 750 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 ACSM2AQ08AH3 577 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 UGT3A2Q3SY77 523 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 AGBL2Q5U5Z8 902 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 ACSM2BQ68CK6 577 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 ATG14Q6ZNE5 492 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 ZCCHC23Q6ZST2 131 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 ST13P4Q8IZP2 240 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-213ENST00000485080 SLC5A8Q8N695 610 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 SIRT6Q8N6T7 355 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 VMP1Q96GC9 406 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 APIPQ96GX9 242 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 KCNK9Q9NPC2 374 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 PNO1Q9NRX1 252 aaKnown RBP16.6■□□□□ 0.25
SREBF1-213ENST00000485080 TEX10Q9NXF1 929 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-213ENST00000485080 CES1P1Q9UKY3 287 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 B3GNT3Q9Y2A9 372 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 HEMK1Q9Y5R4 338 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-213ENST00000485080 DNAJC15Q9Y5T4 150 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 CLCA3PQ9Y6N3 262 aa16.6■□□□□ 0.25
SREBF1-213ENST00000485080 C1orf226A1L170 272 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 SLC28A1O00337 649 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 PGRMC2O15173 223 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 SORBS2O94875 1100 aaKnown RBP16.59■□□□□ 0.25
SREBF1-213ENST00000485080 CHEK2O96017 543 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 SLC35E2P0CK97 266 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 NEFHP12036 1026 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 ALOX15P16050 662 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-213ENST00000485080 TIA1P31483 386 aaKnown RBP eCLIP16.59■□□□□ 0.25
SREBF1-213ENST00000485080 CD97P48960 835 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 CLCN2P51788 898 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 PLIN5Q00G26 463 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 MEP1AQ16819 746 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 NADK2Q4G0N4 442 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 ACER2Q5QJU3 275 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 ABHD17BQ5VST6 288 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 SLC6A19Q695T7 634 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 CLEC6AQ6EIG7 209 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 HDXQ7Z353 690 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 AMER2Q8N7J2 671 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 RBM18Q96H35 190 aaKnown RBP16.59■□□□□ 0.25
SREBF1-213ENST00000485080 CCT7Q99832 543 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 FAIM2Q9BWQ8 316 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 SHCBP1LQ9BZQ2 653 aa16.59■□□□□ 0.25
SREBF1-213ENST00000485080 TMEM120BA0PK00 339 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 A8MUA0 341 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 TMEM114B3SHH9 223 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 RGS14O43566 566 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 PCDH7O60245 1069 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 PRKRAO75569 313 aaKnown RBP16.58■□□□□ 0.24
SREBF1-213ENST00000485080 DDAH2O95865 285 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 IFNA16P05015 189 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 COX7A2P14406 83 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 DRD2P14416 443 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 MAGOHP61326 146 aaKnown RBP16.58■□□□□ 0.24
SREBF1-213ENST00000485080 KIAA0040Q15053 153 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 IMPG1Q17R60 797 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 SPRED3Q2MJR0 410 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 B3GNTL1Q67FW5 361 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-213ENST00000485080 SLC48A1Q6P1K1 146 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 SCIMPQ6UWF3 145 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 LINC00696Q6ZRV3 163 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 Q6ZSR9 355 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 ZNF605Q86T29 641 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 OR4N5Q8IXE1 308 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 Q8NA96 180 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 OR1N1Q8NGS0 311 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 OR8K3Q8NH51 312 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.58■□□□□ 0.241e-323■■■■■ 89.8
SREBF1-213ENST00000485080 FCRL1Q96LA6 429 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 DGAT2Q96PD7 388 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 NPAS2Q99743 824 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 TUBB1Q9H4B7 451 aa16.58■□□□□ 0.24
SREBF1-213ENST00000485080 STMN3Q9NZ72 180 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms