RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 VTI1BQ9UEU0 232 aa17.87■□□□□ 0.45
SNX17-206ENST00000484886 COPG1Q9Y678 874 aaKnown RBP17.87■□□□□ 0.45
SNX17-206ENST00000484886 GABRR3A8MPY1 467 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 MAN1A2O60476 641 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 TRIM13O60858 407 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 VPS4BO75351 444 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 TPP2P29144 1249 aaPredicted RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 HTR6P50406 440 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 TNFSF10P50591 281 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 PLIN5Q00G26 463 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 OC90Q02509 493 aaPredicted RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 CEP85LQ5SZL2 805 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 OR52E8Q6IFG1 317 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 SCIMPQ6UWF3 145 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 C1orf52Q8N6N3 182 aaKnown RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 C7orf57Q8NEG2 295 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 TCP10LQ8TDR4 215 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 SREK1Q8WXA9 508 aaKnown RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 C19orf60Q96EN9 201 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 RBM18Q96H35 190 aaKnown RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 UTP23Q9BRU9 249 aaKnown RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 SENP1Q9P0U3 644 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 VPS4AQ9UN37 437 aa17.86■□□□□ 0.45
SNX17-206ENST00000484886 HELZ2Q9BYK8 2649 aaKnown RBP17.86■□□□□ 0.45
SNX17-206ENST00000484886 H3BQF6 201 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 FCHO1O14526 889 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 UBFD1O14562 309 aaKnown RBP17.85■□□□□ 0.45
SNX17-206ENST00000484886 DYRK3O43781 588 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 OR10H2O60403 315 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 GUCY1B2O75343 617 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 CHN1P15882 459 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 BTKQ06187 659 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 GBP7Q8N8V2 638 aaPredicted RBP17.85■□□□□ 0.45
SNX17-206ENST00000484886 APCDD1LQ8NCL9 501 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 PTPMT1Q8WUK0 201 aaPredicted RBP17.85■□□□□ 0.45
SNX17-206ENST00000484886 SNRNP40Q96DI7 357 aaKnown RBP17.85■□□□□ 0.45
SNX17-206ENST00000484886 NPAS2Q99743 824 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 ACPTQ9BZG2 426 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 ASF1BQ9NVP2 202 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 TEX10Q9NXF1 929 aaPredicted RBP17.85■□□□□ 0.45
SNX17-206ENST00000484886 COPS7AQ9UBW8 275 aa17.85■□□□□ 0.45
SNX17-206ENST00000484886 GPR75O95800 540 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 ALOX15P16050 662 aaPredicted RBP17.84■□□□□ 0.45
SNX17-206ENST00000484886 CREB1P16220 341 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 PIK3R1P27986 724 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 ALDH3A1P30838 453 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 STT3AP46977 705 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 FOXA1P55317 472 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 HMGCS1Q01581 520 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 ACSM2AQ08AH3 577 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 GALNT1Q10472 559 aaPredicted RBP17.84■□□□□ 0.45
SNX17-206ENST00000484886 TBL3Q12788 808 aaKnown RBP17.84■□□□□ 0.45
SNX17-206ENST00000484886 BIKQ13323 160 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 TUBA3CQ13748 450 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 IMPG1Q17R60 797 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 SPDYAQ5MJ70 313 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 NDUFAF5Q5TEU4 345 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 ACSM2BQ68CK6 577 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 TUBA3EQ6PEY2 450 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 LGI4Q8N135 537 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 MORN4Q8NDC4 146 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 PPWD1Q96BP3 646 aaKnown RBP17.84■□□□□ 0.45
SNX17-206ENST00000484886 ZIM3Q96PE6 472 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 MECRQ9BV79 373 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 GATA5Q9BWX5 397 aaPredicted RBP17.84■□□□□ 0.45
SNX17-206ENST00000484886 CLMPQ9H6B4 373 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 FIS1Q9Y3D6 152 aa17.84■□□□□ 0.45
SNX17-206ENST00000484886 GNG14A0A1W2PPG7 69 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 WASHC1A8K0Z3 465 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 PGRMC2O15173 223 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 PRAMEF2O60811 474 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 ZFAND5O76080 213 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 MYZAPP0CAP1 466 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 SERPINB3P29508 390 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 CD96P40200 585 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 MLF1P58340 268 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 IGLV3-21P80748 117 aaPredicted RBP17.83■□□□□ 0.44
SNX17-206ENST00000484886 OR1C1Q15619 314 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 SPIN4Q56A73 249 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 FAM180AQ6UWF9 173 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 HSDL2Q6YN16 418 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 CROCCP2Q86T23 111 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 SLC2A12Q8TD20 617 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 UCN3Q969E3 161 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 C5orf34Q96MH7 638 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 PELOQ9BRX2 385 aaKnown RBP17.83■□□□□ 0.44
SNX17-206ENST00000484886 AGPAT4Q9NRZ5 378 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 PPIEQ9UNP9 301 aaKnown RBP17.83■□□□□ 0.44
SNX17-206ENST00000484886 NBASA2RRP1 2371 aa17.83■□□□□ 0.44
SNX17-206ENST00000484886 CTIFO43310 598 aaKnown RBP17.82■□□□□ 0.44
SNX17-206ENST00000484886 PCDH7O60245 1069 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 UROSP10746 265 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 ALDH9A1P49189 494 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 ZNF766Q5HY98 468 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 C6orf163Q5TEZ5 329 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 CLEC6AQ6EIG7 209 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 ST13P4Q8IZP2 240 aaPredicted RBP17.82■□□□□ 0.44
SNX17-206ENST00000484886 HORMAD2Q8N7B1 307 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 GALNT11Q8NCW6 608 aa17.82■□□□□ 0.44
SNX17-206ENST00000484886 DOK4Q8TEW6 326 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms