RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 MYO1DO94832 1006 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 GPR75O95800 540 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 GBAP04062 536 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 SERPINE1P05121 402 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 TIA1P31483 386 aaKnown RBP eCLIP14.84□□□□□ -0.03
UPF3A-208ENST00000484246 GALNSP34059 522 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 TAS2R50P59544 299 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 RAE1P78406 368 aaKnown RBP14.84□□□□□ -0.03
UPF3A-208ENST00000484246 PLIN5Q00G26 463 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 FOLH1Q04609 750 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 ACSM2AQ08AH3 577 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 NDUFAF5Q5TEU4 345 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 AGBL2Q5U5Z8 902 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 ACSM2BQ68CK6 577 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 SLC6A19Q695T7 634 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 ZCCHC23Q6ZST2 131 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 PTRH1Q86Y79 214 aaKnown RBP14.84□□□□□ -0.03
UPF3A-208ENST00000484246 NUDCD3Q8IVD9 361 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 ST13P4Q8IZP2 240 aaPredicted RBP14.84□□□□□ -0.03
UPF3A-208ENST00000484246 ZADH2Q8N4Q0 377 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 SLC5A8Q8N695 610 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 MORN4Q8NDC4 146 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 VMP1Q96GC9 406 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 APIPQ96GX9 242 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 SHCBP1LQ9BZQ2 653 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 ZBTB20Q9HC78 741 aaPredicted RBP14.84□□□□□ -0.03
UPF3A-208ENST00000484246 PCDHA9Q9Y5H5 950 aa14.84□□□□□ -0.03
UPF3A-208ENST00000484246 CFAP46Q8IYW2 2715 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 MED13Q9UHV7 2174 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 TMEM120BA0PK00 339 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 C1orf226A1L170 272 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 TMEM114B3SHH9 223 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 SLC28A1O00337 649 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 PCDH7O60245 1069 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 PRKRAO75569 313 aaKnown RBP14.83□□□□□ -0.04
UPF3A-208ENST00000484246 CHEK2O96017 543 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 GRK2P25098 689 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 CD97P48960 835 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 SPRED3Q2MJR0 410 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 UGT3A2Q3SY77 523 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 CLEC6AQ6EIG7 209 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 ATG14Q6ZNE5 492 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 KIRREL3Q8IZU9 778 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 CLYBLQ8N0X4 340 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 SIRT6Q8N6T7 355 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 PTPMT1Q8WUK0 201 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-208ENST00000484246 HAS2Q92819 552 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 TM4SF18Q96CE8 201 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 FCRL1Q96LA6 429 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF354BQ96LW1 612 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 FAIM2Q9BWQ8 316 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 KCNK13Q9HB14 408 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 PNO1Q9NRX1 252 aaKnown RBP14.83□□□□□ -0.04
UPF3A-208ENST00000484246 PTGFRNQ9P2B2 879 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 HAO1Q9UJM8 370 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 CES1P1Q9UKY3 287 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 B3GNT3Q9Y2A9 372 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 WBP11Q9Y2W2 641 aaKnown RBP14.83□□□□□ -0.04
UPF3A-208ENST00000484246 HEMK1Q9Y5R4 338 aaPredicted RBP14.83□□□□□ -0.04
UPF3A-208ENST00000484246 DNAJC15Q9Y5T4 150 aa14.83□□□□□ -0.04
UPF3A-208ENST00000484246 FLNBO75369 2602 aaKnown RBP14.82□□□□□ -0.04
UPF3A-208ENST00000484246 SCN3AQ9NY46 2000 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 DDAH2O95865 285 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 SLC35E2P0CK97 266 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 COX7A2P14406 83 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 ALOX15P16050 662 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-208ENST00000484246 SERPINB3P29508 390 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 CLCN2P51788 898 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 MAGOHP61326 146 aaKnown RBP14.82□□□□□ -0.04
UPF3A-208ENST00000484246 KIAA0040Q15053 153 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 IMPG1Q17R60 797 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 NADK2Q4G0N4 442 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 ACER2Q5QJU3 275 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 ABHD17BQ5VST6 288 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 CES4AQ5XG92 561 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 B3GNTL1Q67FW5 361 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-208ENST00000484246 SLC48A1Q6P1K1 146 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 HDXQ7Z353 690 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 Q8NA96 180 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 OR8K3Q8NH51 312 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 FBXL20Q96IG2 436 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 DGAT2Q96PD7 388 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 NPAS2Q99743 824 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 CCT7Q99832 543 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 SH3GL2Q99962 352 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 TUBB1Q9H4B7 451 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 KCNK9Q9NPC2 374 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 EHD3Q9NZN3 535 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 ZNF223Q9UK11 482 aaPredicted RBP14.82□□□□□ -0.04
UPF3A-208ENST00000484246 TRAF6Q9Y4K3 522 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 CLCA3PQ9Y6N3 262 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 CCDC88CQ9P219 2028 aa14.82□□□□□ -0.04
UPF3A-208ENST00000484246 C17orf105B2RV13 164 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 PGRMC2O15173 223 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 RGS14O43566 566 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 IGKV3-11P04433 115 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 IFNA16P05015 189 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 DRD2P14416 443 aa14.81□□□□□ -0.04
UPF3A-208ENST00000484246 WDR4P57081 412 aaKnown RBP14.81□□□□□ -0.04
UPF3A-208ENST00000484246 ID2Q02363 134 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms