RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 C14orf105Q9NVL8 296 aa13.27□□□□□ -0.29
SRSF6-202ENST00000483871 C3orf18Q9UK00 162 aa13.27□□□□□ -0.29
SRSF6-202ENST00000483871 UTS2RQ9UKP6 389 aa13.27□□□□□ -0.29
SRSF6-202ENST00000483871 MRPS33Q9Y291 106 aaKnown RBP13.27□□□□□ -0.29
SRSF6-202ENST00000483871 WBP11Q9Y2W2 641 aaKnown RBP13.27□□□□□ -0.29
SRSF6-202ENST00000483871 ARL2BPQ9Y2Y0 163 aa13.27□□□□□ -0.29
SRSF6-202ENST00000483871 NCOR2Q9Y618 2525 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 DMXL2Q8TDJ6 3036 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 SCAMP2O15127 329 aaKnown RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 SLC22A3O75751 556 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 HEXBP07686 556 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 LAMP1P11279 417 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 COX7A2P14406 83 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 PRPS1L1P21108 318 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 PTPN4P29074 926 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 FEN1P39748 380 aaKnown RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 ZFP36L2P47974 494 aaKnown RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 EMP2P54851 167 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 PCBP4P57723 403 aaKnown RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 STX1BP61266 288 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 DUSP2Q05923 314 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 ACTN3Q08043 901 aaPredicted RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 LANCL3Q6ZV70 420 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 FUNDC1Q8IVP5 155 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 SCUBE1Q8IWY4 988 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 PLPP5Q8NEB5 264 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 OR2Y1Q8NGV0 311 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 ADAMTS18Q8TE60 1221 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 TANKQ92844 425 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 CNRIP1Q96F85 164 aaPredicted RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 CRB3Q9BUF7 120 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 CCDC86Q9H6F5 360 aaKnown RBP13.26□□□□□ -0.29
SRSF6-202ENST00000483871 CCDC167Q9P0B6 97 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 CACNA1AO00555 2505 aa13.26□□□□□ -0.29
SRSF6-202ENST00000483871 C1QTNF9BB2RNN3 333 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 C21orf140B9A014 251 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 GPR75O95800 540 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 CAPNS1P04632 268 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 C1QTNF9P0C862 333 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 LIFP15018 202 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 EFNA1P20827 205 aaPredicted RBP13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PPP2R1BP30154 601 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PTGER1P34995 402 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 DGKQP52824 942 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 HSD17B7P56937 341 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PHC1P78364 1004 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PDE7AQ13946 482 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 SQLEQ14534 574 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 NSDHLQ15738 373 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PGS1Q32NB8 556 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 OR52E8Q6IFG1 317 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 QSOX2Q6ZRP7 698 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 OR4K14Q8NGD5 310 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 DOK4Q8TEW6 326 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 CIDECQ96AQ7 238 aaPredicted RBP13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PPWD1Q96BP3 646 aaKnown RBP13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PPCDCQ96CD2 204 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 KLHL29Q96CT2 875 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 ALOXE3Q9BYJ1 711 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 GPN2Q9H9Y4 310 aaPredicted RBP13.25□□□□□ -0.29
SRSF6-202ENST00000483871 SLC35C2Q9NQQ7 365 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 PRDM9Q9NQV7 894 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 ZIM2Q9NZV7 527 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 ATP6V1HQ9UI12 483 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 NXT1Q9UKK6 140 aaKnown RBP13.25□□□□□ -0.29
SRSF6-202ENST00000483871 NUP214P35658 2090 aaPredicted RBP13.25□□□□□ -0.29
SRSF6-202ENST00000483871 LOC400499M0QZD8 3231 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 NUP210LQ5VU65 1888 aa13.25□□□□□ -0.29
SRSF6-202ENST00000483871 IGHV3-20A0A0C4DH32 117 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 FCHO1O14526 889 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 WT1P19544 449 aaPredicted RBP13.24□□□□□ -0.29
SRSF6-202ENST00000483871 PIK3R1P27986 724 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 HPCAL1P37235 193 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 FOLR3P41439 243 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 ATP4BP51164 291 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 XKP51811 444 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 STX4Q12846 297 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 FAM174BQ3ZCQ3 159 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 AGKQ53H12 422 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 SPANXN4Q5MJ08 99 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 OR4F3Q6IEY1 312 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 CCDC116Q8IYX3 515 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 FAM9CQ8IZT9 166 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 CPSF7Q8N684 471 aaKnown RBP13.24□□□□□ -0.29
SRSF6-202ENST00000483871 C8orf44Q96CB5 159 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 COQ8BQ96D53 544 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 ZNF681Q96N22 645 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 GPR87Q9BY21 358 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 SLAMF7Q9NQ25 335 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 EHD3Q9NZN3 535 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 KCND3Q9UK17 655 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 PSME2Q9UL46 239 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 MMACHCQ9Y4U1 282 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 IGKV3D-11A0A0A0MRZ8 115 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 BLACEA4D250 179 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 A8MUA0 341 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 KLK10O43240 276 aa13.24□□□□□ -0.29
SRSF6-202ENST00000483871 ALOX12BO75342 701 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms