RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 HRKO00198 91 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 C1QAP02745 245 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 C8BP07358 591 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 GABRB3P28472 473 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 OPRM1P35372 400 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 SOX18P35713 384 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 ANP32AP39687 249 aaKnown RBP9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 SLCO1A2P46721 670 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 VPS41P49754 854 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 AP1S2P56377 157 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 STXBP1P61764 594 aaKnown RBP9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 STX4Q12846 297 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 VASNQ6EMK4 673 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 C4orf22Q6V702 233 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 VN1R5Q7Z5H4 357 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 LUZP2Q86TE4 346 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 C9orf106Q8NAJ2 232 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 MBD3L2Q8NHZ7 208 aaPredicted RBP9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 PPP1R14CQ8TAE6 165 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 CCT6BQ92526 530 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 PIGTQ969N2 578 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 ISL2Q96A47 359 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 TAS2R13Q9NYV9 303 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 CNOT11Q9UKZ1 510 aaKnown RBP9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 DAPP1Q9UN19 280 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 NPFFR2Q9Y5X5 522 aa9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 CHCHD2Q9Y6H1 151 aaPredicted RBP9.96□□□□□ -0.82
SMARCC1-205ENST00000483847 MAGEB16A2A368 324 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 SDR42E2A6NKP2 422 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 TRIM3O75382 744 aaPredicted RBP9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 TRAPPC6AO75865 159 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 ACSL3O95573 720 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 CNOT4O95628 575 aaKnown RBP9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 NID1P14543 1247 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 MAGEA6P43360 314 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 ARMC3Q5W041 872 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 BICRALQ6AI39 1079 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 DRICH1Q6PGQ1 229 aaPredicted RBP9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 SBSNQ6UWP8 590 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 PLXDC2Q6UX71 529 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 DGAT2L6Q6ZPD8 337 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 LMNTD2Q8IXW0 634 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 OR2L5Q8NG80 312 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 SLC22A8Q8TCC7 542 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 DOK4Q8TEW6 326 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 ATL1Q8WXF7 558 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 WDYHV1Q96HA8 205 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 SERINC2Q96SA4 455 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 CCL19Q99731 98 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 DESI2Q9BSY9 194 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 DOHHQ9BU89 302 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 UGT2B28Q9BY64 529 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 UBTD1Q9HAC8 227 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 IARS2Q9NSE4 1012 aaKnown RBP9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 CNIH4Q9P003 139 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 COPS7AQ9UBW8 275 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 EIF3LQ9Y262 564 aaKnown RBP9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 MED12Q93074 2177 aa9.95□□□□□ -0.82
SMARCC1-205ENST00000483847 RAI1Q7Z5J4 1906 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 PABPN1LA6NDY0 278 aaKnown RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 DEFB108AA8MXU0 73 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 CES2O00748 559 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 CASKO14936 926 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 ERN1O75460 977 aaKnown RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 IL18BPO95998 194 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 IGKV3-11P04433 115 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 HPNP05981 417 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 FBXO45P0C2W1 286 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 TMIGD3P0DMS9 266 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 BMP7P18075 431 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 MTTPP55157 894 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 IL2P60568 153 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 KIF5AQ12840 1032 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 GPS1Q13098 491 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 SLBPQ14493 270 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 EFTUD2Q15029 972 aaKnown RBP eCLIP9.94□□□□□ -0.828e-11■■□□□ 11.8
SMARCC1-205ENST00000483847 ACKR1Q16570 336 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 PPP1R3AQ16821 1122 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 C18orf21Q32NC0 220 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 ADPRMQ3LIE5 342 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 FNDC7Q5VTL7 733 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 ABHD17CQ6PCB6 329 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 TMIGD1Q6UXZ0 262 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 TMEM64Q6YI46 380 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 SLCO4C1Q6ZQN7 724 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 SYDE1Q6ZW31 735 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 OR4N5Q8IXE1 308 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 PM20D2Q8IYS1 436 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 C2CD4AQ8NCU7 369 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 NUBPLQ8TB37 319 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 CALML6Q8TD86 181 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 SLC44A1Q8WWI5 657 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 ANKRD9Q96BM1 317 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 PPWD1Q96BP3 646 aaKnown RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 SENP5Q96HI0 755 aaPredicted RBP9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 ZNF597Q96LX8 424 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 MAPKAP1Q9BPZ7 522 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 PIGQQ9BRB3 760 aa9.94□□□□□ -0.82
SMARCC1-205ENST00000483847 TRIM54Q9BYV2 358 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms