RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 IGKV3D-11A0A0A0MRZ8 115 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 A0A0G2JND7 137 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 A8MUA0 341 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 CTNSO60931 367 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ALDOCP09972 364 aaKnown RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ALOX15P16050 662 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 IDH3AP50213 366 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 UCNP55089 124 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 EMX2Q04743 252 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 MAD2L1Q13257 205 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ZNF750Q32MQ0 723 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 TMEM198Q66K66 360 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ANKRD26P1Q6NSI1 321 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 CGB2Q6NT52 195 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 PLPP5Q8NEB5 264 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 DNAJB14Q8TBM8 379 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 EXOSC8Q96B26 276 aaKnown RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 ANKRD9Q96BM1 317 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-224ENST00000483359 KLHL29Q96CT2 875 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 MIEF1Q9NQG6 463 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 P4HTMQ9NXG6 502 aa16.73■□□□□ 0.27
CPNE1-224ENST00000483359 K7ENP7 123 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 SEC24DO94855 1032 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-224ENST00000483359 IGHEP01854 428 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 IFNA16P05015 189 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 SEC24CP53992 1094 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 NME5P56597 212 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 OR4D2P58180 307 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 GNGT1P63211 74 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 VAC14Q08AM6 782 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 LSM12Q3MHD2 195 aaKnown RBP16.72■□□□□ 0.27
CPNE1-224ENST00000483359 SFT2D3Q587I9 215 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 FAM71E1Q6IPT2 247 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 SLC48A1Q6P1K1 146 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 INO80CQ6PI98 192 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-224ENST00000483359 TMEM205Q6UW68 189 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 ACAD11Q709F0 780 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 OR11G2Q8NGC1 345 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.72■□□□□ 0.278e-8■■■■■ 32.7
CPNE1-224ENST00000483359 TANKQ92844 425 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 ZNF317Q96PQ6 595 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-224ENST00000483359 ALOXE3Q9BYJ1 711 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 TRIM55Q9BYV6 548 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 FAM107BQ9H098 131 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 TCF7L2Q9NQB0 619 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 PNO1Q9NRX1 252 aaKnown RBP16.72■□□□□ 0.27
CPNE1-224ENST00000483359 C19orf25Q9UFG5 118 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-224ENST00000483359 FBXL4Q9UKA2 621 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 UTS2RQ9UKP6 389 aa16.72■□□□□ 0.27
CPNE1-224ENST00000483359 DSPP15924 2871 aaKnown RBP16.71■□□□□ 0.27
CPNE1-224ENST00000483359 TCRBV16S1A1N1A0A5B0 115 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 BLACEA4D250 179 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 E9PBE3 544 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 KLHL41O60662 606 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 DDCP20711 480 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 LSP1P33241 339 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 ACTN3Q08043 901 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-224ENST00000483359 CHAF1BQ13112 559 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 DEFB109BQ30KR1 87 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 MED25Q71SY5 747 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 TICAM1Q8IUC6 712 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 NUDT8Q8WV74 236 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 EXO1Q9UQ84 846 aaKnown RBP16.71■□□□□ 0.27
CPNE1-224ENST00000483359 MAN2B2Q9Y2E5 1009 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 MGAQ8IWI9 3026 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 ARGFXA6NJG6 315 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 PEX12O00623 359 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 TGDSO95455 350 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 TROVE2P10155 538 aaKnown RBP eCLIP16.71■□□□□ 0.27
CPNE1-224ENST00000483359 PRPS2P11908 318 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 COX6A1P12074 109 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 PIK3R1P27986 724 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 PTGER1P34995 402 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 GSTM5P46439 218 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 CPZQ66K79 652 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 C19orf48Q6RUI8 117 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 IKBIPQ70UQ0 350 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 CPEB2Q7Z5Q1 589 aaKnown RBP16.71■□□□□ 0.27
CPNE1-224ENST00000483359 KRTCAP2Q8N6L1 136 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 CEP70Q8NHQ1 597 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 ACTRT2Q8TDY3 377 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 DOK4Q8TEW6 326 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 PPWD1Q96BP3 646 aaKnown RBP16.71■□□□□ 0.27
CPNE1-224ENST00000483359 CHMP6Q96FZ7 201 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 CES1P1Q9UKY3 287 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 POLHQ9Y253 713 aa16.71■□□□□ 0.27
CPNE1-224ENST00000483359 IGHV1-45A0A0A0MS14 117 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 GPR75O95800 540 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 DRD2P14416 443 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 FEN1P39748 380 aaKnown RBP16.7■□□□□ 0.26
CPNE1-224ENST00000483359 OGFOD2Q6N063 350 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 OR4K14Q8NGD5 310 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 RABEP2Q9H5N1 569 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 ZNF160Q9HCG1 818 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 PTPRQQ9UMZ3 2332 aa16.7■□□□□ 0.26
CPNE1-224ENST00000483359 NSG1A0A0A6YYJ2 146 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 CYC1P08574 325 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 ASMTP46597 345 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 PCOLCEQ15113 449 aa16.69■□□□□ 0.26
CPNE1-224ENST00000483359 PRSS53Q2L4Q9 553 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms