RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 ERAL1O75616 437 aaKnown RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 GPR75O95800 540 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 RECKO95980 971 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 DDX5P17844 614 aaKnown RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 MAOAP21397 527 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PIK3R1P27986 724 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PTPN4P29074 926 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 IL12AP29459 219 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 FOLR3P41439 243 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 C21orf58P58505 322 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 RHAGQ02094 409 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 FOLH1Q04609 750 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 STX4Q12846 297 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PDE7AQ13946 482 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 UBAP2LQ14157 1087 aaKnown RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 UGT8Q16880 541 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PRSS53Q2L4Q9 553 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 PGS1Q32NB8 556 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 AGKQ53H12 422 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 CPTPQ5TA50 214 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 QSOX2Q6ZRP7 698 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 TMEM151BQ8IW70 566 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 ANKS4BQ8N8V4 417 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 GLB1L3Q8NCI6 653 aaPredicted RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 PLPP5Q8NEB5 264 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 OR4K14Q8NGD5 310 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 OR9I1Q8NGQ6 314 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 OR2Y1Q8NGV0 311 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 KIAA1143Q96AT1 154 aaPredicted RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
SDC1-206ENST00000482879 KLHL29Q96CT2 875 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 CRB3Q9BUF7 120 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 GPR87Q9BY21 358 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 VN1R1Q9GZP7 353 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 SLC35C2Q9NQQ7 365 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 GIMAP4Q9NUV9 329 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 MRGBPQ9NV56 204 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 TAS2R7Q9NYW3 318 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 C3orf18Q9UK00 162 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 KCND3Q9UK17 655 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 ZNF780BQ9Y6R6 833 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 AKAP13Q12802 2813 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 CEP295Q9C0D2 2601 aa11.5□□□□□ -0.57
SDC1-206ENST00000482879 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 TBX19O60806 448 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ALOX12BO75342 701 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 DCTN3O75935 186 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 C8orf89P0DMQ9 161 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 LAMP1P11279 417 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 F8A1P23610 371 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 S100A3P33764 101 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 FEN1P39748 380 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 XKP51811 444 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 POLR2JP52435 117 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 RPS18P62269 152 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 SRSF11Q05519 484 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 NSDHLQ15738 373 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ZNF750Q32MQ0 723 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ZNF385BQ569K4 471 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 FAM69BQ5VUD6 431 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 FAAH2Q6GMR7 532 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 FAM180BQ6P0A1 224 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 SCUBE1Q8IWY4 988 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 METTL21AQ8WXB1 218 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 TSLPQ969D9 159 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 TESCQ96BS2 214 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 COQ8BQ96D53 544 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 NAF1Q96HR8 494 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 BBS4Q96RK4 519 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ALOXE3Q9BYJ1 711 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 FAM117AQ9C073 453 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 CLMPQ9H6B4 373 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 GPN2Q9H9Y4 310 aaPredicted RBP11.49□□□□□ -0.57
SDC1-206ENST00000482879 NECTIN3Q9NQS3 549 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ATAD3AQ9NVI7 634 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 CCDC167Q9P0B6 97 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ARMCX1Q9P291 453 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 TCFL5Q9UL49 500 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 ENTPD4Q9Y227 616 aa11.49□□□□□ -0.57
SDC1-206ENST00000482879 MED19A0JLT2 244 aaPredicted RBP11.48□□□□□ -0.57
SDC1-206ENST00000482879 FAM234BA2RU67 622 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 TGFBR3LH3BV60 316 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 TLX3O43711 291 aaPredicted RBP11.48□□□□□ -0.57
SDC1-206ENST00000482879 UMODP07911 640 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 CYC1P08574 325 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 CPMP14384 443 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 PORP16435 677 aaPredicted RBP11.48□□□□□ -0.57
SDC1-206ENST00000482879 CSNK2A2P19784 350 aaPredicted RBP11.48□□□□□ -0.57
SDC1-206ENST00000482879 ADSLP30566 484 aaPredicted RBP11.48□□□□□ -0.57
SDC1-206ENST00000482879 KIR3DL1P43629 444 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 EFNA3P52797 238 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 DGKQP52824 942 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 KLF10Q13118 480 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 CLN3Q13286 438 aa11.48□□□□□ -0.57
SDC1-206ENST00000482879 BIKQ13323 160 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms