RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PHF11Q9UIL8 331 aa12.47□□□□□ -0.41
CTDSP1-208ENST00000482272 TNPO3Q9Y5L0 923 aaKnown RBP12.47□□□□□ -0.41
CTDSP1-208ENST00000482272 GTF3C1Q12789 2109 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 CSMD2Q7Z408 3487 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 A0A096LPK6 155 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 H0YIV9 168 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 ADAM10O14672 748 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 UGDHO60701 494 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 ETHE1O95571 254 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 P04436 131 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 BUD31P41223 144 aaPredicted RBP12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 STT3AP46977 705 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 IGLV3-21P80748 117 aaPredicted RBP12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 ID2Q02363 134 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 SETDB1Q15047 1291 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 PCBP2Q15366 365 aaKnown RBP eCLIP12.46□□□□□ -0.416e-8■■□□□ 14.4
CTDSP1-208ENST00000482272 MPEG1Q2M385 716 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 GK5Q6ZS86 529 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 CD163Q86VB7 1156 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 OR4N5Q8IXE1 308 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 ZCCHC7Q8N3Z6 543 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 GOLM1Q8NBJ4 401 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 SENP5Q96HI0 755 aaPredicted RBP12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 SCYL1Q96KG9 808 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 GPR78Q96P69 363 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 MTERF1Q99551 399 aaKnown RBP12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 FAM173AQ9BQD7 235 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 IPPKQ9H8X2 491 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 SNX15Q9NRS6 342 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 PLSCR2Q9NRY7 297 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 SACM1LQ9NTJ5 587 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 PSD3Q9NYI0 1048 aa12.46□□□□□ -0.41
CTDSP1-208ENST00000482272 CENPEQ02224 2701 aa12.46□□□□□ -0.42
CTDSP1-208ENST00000482272 EML6Q6ZMW3 1958 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 C19orf84I3L1E1 186 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 FGF17O60258 216 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 KLK8O60259 260 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 ZNF354AO60765 605 aaPredicted RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 ELAVL4P26378 380 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 PIK3CGP48736 1102 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 RPS13P62277 151 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 GTF2H2Q13888 395 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 CPSF6Q16630 551 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 PIGGQ5H8A4 983 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 GTF2H2CQ6P1K8 395 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 METTL2BQ6P1Q9 378 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 FAM47EQ6ZV65 393 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 PLD6Q8N2A8 252 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 NUBPLQ8TB37 319 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 ASB5Q8WWX0 329 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 PPWD1Q96BP3 646 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 PELOQ9BRX2 385 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 TTTY12Q9BZ98 90 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 TSPYL1Q9H0U9 437 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 WDR41Q9HAD4 459 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 DMRT3Q9NQL9 472 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 RYDENQ9NUL5 291 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 ZNF358Q9NW07 568 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 LYARQ9NX58 379 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 NINJ2Q9NZG7 142 aa12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 CPSF2Q9P2I0 782 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
CTDSP1-208ENST00000482272 IQANK1A0A1B0GTG1 560 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 PINLYPA6NC86 204 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 PLPP1O14494 284 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 PROM1O43490 865 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ALDOAP04075 364 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 RBP1P09455 135 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ALOX15P16050 662 aaPredicted RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ECHS1P30084 290 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 SSTR2P30874 369 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 KIR3DL1P43629 444 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 SERPINB8P50452 374 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 PLIN5Q00G26 463 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 TNFRSF17Q02223 184 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 FOLH1Q04609 750 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 TBL3Q12788 808 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ASPHQ12797 758 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 CUL3Q13618 768 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 SLC22A10Q63ZE4 541 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 C18orf63Q68DL7 685 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 CYP20A1Q6UW02 462 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 GOLGA7Q7Z5G4 137 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ST13P4Q8IZP2 240 aaPredicted RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 SLC15A4Q8N697 577 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 L3MBTL4Q8NA19 623 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 NOA1Q8NC60 698 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 SLC22A8Q8TCC7 542 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 RND1Q92730 232 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 SPOCK3Q9BQ16 436 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ZNF717Q9BY31 904 aaPredicted RBP12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 VPS11Q9H270 941 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ACSS3Q9H6R3 686 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 ZDHHC11Q9H8X9 412 aa12.44□□□□□ -0.42
CTDSP1-208ENST00000482272 IL1RL2Q9HB29 575 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms