RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PHF11Q9UIL8 331 aa9.72□□□□□ -0.85
CPSF4-212ENST00000482251 PCTPQ9UKL6 214 aa9.72□□□□□ -0.85
CPSF4-212ENST00000482251 NFU1Q9UMS0 254 aa9.72□□□□□ -0.85
CPSF4-212ENST00000482251 YARS2Q9Y2Z4 477 aaKnown RBP9.72□□□□□ -0.85
CPSF4-212ENST00000482251 PCDHGA11Q9Y5H2 935 aa9.72□□□□□ -0.85
CPSF4-212ENST00000482251 CRYBG3Q68DQ2 2970 aa9.72□□□□□ -0.85
CPSF4-212ENST00000482251 A0A087WUV0 522 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 A0A0A6YYD5 115 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 A0A1B0GTH9 108 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 A0A1B0GTL3 188 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 EXOC1LA0A1B0GW35 172 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 A0A1W2PS29 197 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 H0YIV9 168 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 KLRC4-KLRK1H3BQV0 150 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 OR10H2O60403 315 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 SMIM24O75264 130 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 KRT38O76015 456 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CLDN9O95484 217 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 AIFM1O95831 613 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 TUBB4AP04350 444 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 COX7A2P14406 83 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 BSGP35613 385 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 BUD31P41223 144 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 STT3AP46977 705 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 SERPINB9P50453 376 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 HERVK_113P63132 956 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ERVK-8P63133 956 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 PLGLB1Q02325 96 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ASPHQ12797 758 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 TRAF3Q13114 568 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CDSNQ15517 529 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF750Q32MQ0 723 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 KRTCAP3Q53RY4 240 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 TEX35Q5T0J7 233 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 TTC19Q6DKK2 380 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CYP20A1Q6UW02 462 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CD163Q86VB7 1156 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 NUDT13Q86X67 352 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CHERPQ8IWX8 916 aaKnown RBP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 C9orf40Q8IXQ3 194 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ZCCHC7Q8N3Z6 543 aaKnown RBP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 OR52N2Q8NGI0 321 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 WDR20Q8TBZ3 569 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF721Q8TF20 911 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 AGAP11Q8TF27 550 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ISL2Q96A47 359 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 PHF12Q96QT6 1004 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 HBEGFQ99075 208 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ERVK-6Q9BXR3 956 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 FUT8Q9BYC5 575 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ZBTB26Q9HCK0 441 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ADGRE2Q9UHX3 823 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ERVK-19Q9WJR5 959 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF835Q9Y2P0 537 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 TNPO3Q9Y5L0 923 aaKnown RBP9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CACNA1DQ01668 2161 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 CREBBPQ92793 2442 aa9.71□□□□□ -0.86
CPSF4-212ENST00000482251 A0A1W2PR48 441 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 A8MT66 165 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 PPP6CO00743 305 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 UGDHO60701 494 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 LRATO95237 230 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 TPOP07202 933 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 RBP1P09455 135 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 RHOXF2BP0C7M4 288 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 FAM58BPP0C7Q3 252 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 CCL3P10147 92 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 PRF1P14222 555 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 ALOX15P16050 662 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 PTX3P26022 381 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 TLX1P31314 330 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 DNASE1L1P49184 302 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 CDH13P55290 713 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 IGLV3-21P80748 117 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 TSNAXIP1Q2TAA8 658 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 CMPK2Q5EBM0 449 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 Q6ZPB1 254 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 ZNF808Q8N4W9 903 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 L3MBTL4Q8NA19 623 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 POGLUT1Q8NBL1 392 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 LRRN4CLQ8ND94 238 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 OR2M7Q8NG81 312 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 OR4F6Q8NGB9 312 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 RHOXF2Q9BQY4 288 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 MRPL1Q9BYD6 325 aaKnown RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 TSPYL1Q9H0U9 437 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 DEFB127Q9H1M4 99 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 MRPL46Q9H2W6 279 aaKnown RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 FARSBQ9NSD9 589 aaKnown RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 LYARQ9NX58 379 aaKnown RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 TEX10Q9NXF1 929 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-212ENST00000482251 MS4A12Q9NXJ0 267 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 MEMO1Q9Y316 297 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 LIPGQ9Y5X9 500 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 MYO9AB2RTY4 2548 aa9.7□□□□□ -0.86
CPSF4-212ENST00000482251 CCDC189A1A4V9 331 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 SYNDIG1LA6NDD5 238 aa9.69□□□□□ -0.86
CPSF4-212ENST00000482251 STX16-NPEPL1H3BU86 382 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms