RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 GOLGA7Q7Z5G4 137 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 GPALPP1Q8IXQ4 340 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 PLD6Q8N2A8 252 aaKnown RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 MARVELD2Q8N4S9 558 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 PHF10Q8WUB8 498 aaKnown RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 UCN3Q969E3 161 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 SDCCAG3Q96C92 435 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 SENP5Q96HI0 755 aaPredicted RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 DGAT2Q96PD7 388 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 VPS11Q9H270 941 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 RPF2Q9H7B2 306 aaKnown RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 ACTR8Q9H981 624 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 RNF11Q9Y3C5 154 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 PDZD2O15018 2839 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 KLK8O60259 260 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 EEDO75530 441 aaKnown RBP17.18■□□□□ 0.34
CLK1-211ENST00000481641 KLHL2O95198 593 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 TYK2P29597 1187 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 PIK3CBP42338 1070 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 STT3AP46977 705 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 NEK2P51955 445 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 ALDH18A1P54886 795 aaKnown RBP17.18■□□□□ 0.34
CLK1-211ENST00000481641 FOLH1Q04609 750 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 ASPHQ12797 758 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 GTF2H2Q13888 395 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 CPSF6Q16630 551 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLK1-211ENST00000481641 LIPJQ5W064 366 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 GTF2H2CQ6P1K8 395 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 CEP128Q6ZU80 1094 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 GPR180Q86V85 440 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 ZNF295-AS1Q8N0V1 137 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 RPRMLQ8N4K4 120 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 OR8K3Q8NH51 312 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 ZNF717Q9BY31 904 aaPredicted RBP17.18■□□□□ 0.34
CLK1-211ENST00000481641 TTTY12Q9BZ98 90 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 TRIM8Q9BZR9 551 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 IPPKQ9H8X2 491 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 PLSCR2Q9NRY7 297 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 ADGRE2Q9UHX3 823 aa17.18■□□□□ 0.34
CLK1-211ENST00000481641 GLOD5A6NK44 160 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 TMPRSS11DO60235 418 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 CNR1P21554 472 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 PTGER4P35408 488 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 DNASE1L1P49184 302 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 TNFRSF17Q02223 184 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 CKAP4Q07065 602 aaKnown RBP17.17■□□□□ 0.34
CLK1-211ENST00000481641 PCBP2Q15366 365 aaKnown RBP eCLIP17.17■□□□□ 0.34
CLK1-211ENST00000481641 EMC4Q5J8M3 183 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 RTL4Q6ZR62 310 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 GDF7Q7Z4P5 450 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 C9orf40Q8IXQ3 194 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 ADGRG4Q8IZF6 3080 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 OR5L2Q8NGL0 311 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 CDK15Q96Q40 435 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 COPS7AQ9UBW8 275 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 PCDHGA11Q9Y5H2 935 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 LIPGQ9Y5X9 500 aa17.17■□□□□ 0.34
CLK1-211ENST00000481641 CSMD2Q7Z408 3487 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 NPIPA2E9PIF3 369 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 NPIPA3F8WFD2 350 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 H0YIV9 168 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 PROM1O43490 865 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 URI1O94763 535 aaPredicted RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 GBAP04062 536 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 IGKV3-11P04433 115 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 CCL3P10147 92 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 COX7A2P14406 83 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 PTX3P26022 381 aaPredicted RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 BSGP35613 385 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 SERPINB8P50452 374 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 PIGGQ5H8A4 983 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 TECRLQ5HYJ1 363 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 ARHGAP11AQ6P4F7 1023 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 CCDC91Q7Z6B0 441 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 ZCCHC7Q8N3Z6 543 aaKnown RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 PTGR2Q8N8N7 351 aaPredicted RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 CA5BP1Q8WTZ4 195 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 TANKQ92844 425 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 PHF21BQ96EK2 531 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 RBM18Q96H35 190 aaKnown RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 C16orf45Q96MC5 204 aaPredicted RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 CENPKQ9BS16 269 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 CNPPD1Q9BV87 410 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 ACSS3Q9H6R3 686 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 ZDHHC11Q9H8X9 412 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 SEMA4BQ9NPR2 832 aaPredicted RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 MS4A12Q9NXJ0 267 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 DMGDHQ9UI17 866 aaKnown RBP17.16■□□□□ 0.34
CLK1-211ENST00000481641 PHF11Q9UIL8 331 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 TSC22D4Q9Y3Q8 395 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 ASB4Q9Y574 426 aa17.16■□□□□ 0.34
CLK1-211ENST00000481641 A0A0A6YYD5 115 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 A0A1W2PR48 441 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 OR7A17O14581 309 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 GLSO94925 669 aaPredicted RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 NADKO95544 446 aaPredicted RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 ACSL3O95573 720 aa17.15■□□□□ 0.34
CLK1-211ENST00000481641 ALOX15P16050 662 aaPredicted RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 TLX1P31314 330 aaPredicted RBP17.15■□□□□ 0.34
CLK1-211ENST00000481641 PHBP35232 272 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms