RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ADAD1Q96M93 576 aaKnown RBP10.72□□□□□ -0.69
USP11-208ENST00000480104 PANX3Q96QZ0 392 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 IKBKGQ9Y6K9 419 aa10.72□□□□□ -0.69
USP11-208ENST00000480104 EIF3FO00303 357 aaPredicted RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 PLOD2O00469 737 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 CST8O60676 142 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 PSIP1O75475 530 aaKnown RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 RBP3P10745 1247 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 APEHP13798 732 aaKnown RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 PTNP21246 168 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 GMPRP36959 345 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 CCZ1BP86790 482 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 PCDH1Q08174 1060 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 SLC13A2Q13183 592 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 GBX1Q14549 363 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 PRPSAP1Q14558 356 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 SBSNQ6UWP8 590 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 MFSD7Q6UXD7 560 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 P4HA3Q7Z4N8 544 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 PEG10Q86TG7 708 aaKnown RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 KBTBD8Q8NFY9 601 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 OR14A16Q8NHC5 309 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 SLC2A12Q8TD20 617 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 UTP15Q8TED0 518 aaKnown RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 TP53INP1Q96A56 240 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 RILPQ96NA2 401 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 CACNG6Q9BXT2 260 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 CLK4Q9HAZ1 481 aaKnown RBP10.71□□□□□ -0.69
USP11-208ENST00000480104 PRTFDC1Q9NRG1 225 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 SLC2A6Q9UGQ3 507 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 METRNQ9UJH8 293 aa10.71□□□□□ -0.69
USP11-208ENST00000480104 C4orf51C9J302 202 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 HCRTR2O43614 444 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 SYF2O95926 243 aaKnown RBP10.7□□□□□ -0.7
USP11-208ENST00000480104 CATP04040 527 aaKnown RBP10.7□□□□□ -0.7
USP11-208ENST00000480104 CD3EP07766 207 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 FBXO45P0C2W1 286 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 CD8BP10966 210 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 CDH1P12830 882 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 PAMP19021 973 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 RBL1P28749 1068 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 HNF4AP41235 474 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 MASP1P48740 699 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 HSD17B7P56937 341 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 PWP1Q13610 501 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 RPS6KA1Q15418 735 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 OR4L1Q8NH43 312 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 P3H4Q92791 437 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 DIO2Q92813 273 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 C3orf49Q96BT1 292 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 FAM136AQ96C01 138 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 CTHRC1Q96CG8 243 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 MRFAP1L1Q96HT8 127 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 RBM4Q9BWF3 364 aaKnown RBP10.7□□□□□ -0.7
USP11-208ENST00000480104 GRIP2Q9C0E4 1043 aa10.7□□□□□ -0.7
USP11-208ENST00000480104 PLCE1Q9P212 2302 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ANKRD33BA6NCL7 494 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ESPNB1AK53 854 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 IMPA1P29218 277 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ATP5DP30049 168 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 GCKP35557 465 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 GRK3P35626 688 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 TBPL1P62380 186 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 RGS1Q08116 209 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 LGALS3BPQ08380 585 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ZNF844Q08AG5 666 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 TFDP2Q14188 446 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 KCNJ11Q14654 390 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 BBS9Q3SYG4 887 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ACSBG2Q5FVE4 666 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 TBCELQ5QJ74 424 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ENPP6Q6UWR7 440 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 DNAJC14Q6Y2X3 702 aaPredicted RBP10.69□□□□□ -0.7
USP11-208ENST00000480104 STAC2Q6ZMT1 411 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 C9orf40Q8IXQ3 194 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 SNX31Q8N9S9 440 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 FAM47BQ8NA70 645 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 ACTR6Q9GZN1 396 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 P2RY12Q9H244 342 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 CCDC177Q9NQR7 707 aaPredicted RBP10.69□□□□□ -0.7
USP11-208ENST00000480104 CTTNBP2NLQ9P2B4 639 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 MARCH4Q9P2E8 410 aaPredicted RBP10.69□□□□□ -0.7
USP11-208ENST00000480104 FETUBQ9UGM5 382 aa10.69□□□□□ -0.7
USP11-208ENST00000480104 IGHV4-61A0A0C4DH41 118 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 HACD1B0YJ81 288 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 C17orf105B2RV13 164 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 TRIM77I1YAP6 450 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 EMC8O43402 210 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 OR1F1O43749 312 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 VSIG8P0DPA2 414 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 SERPINB3P29508 390 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 PPARGP37231 505 aaPredicted RBP10.68□□□□□ -0.7
USP11-208ENST00000480104 CDKN2BP42772 138 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 STARP49675 285 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 FUT7Q11130 342 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 CYP1B1Q16678 543 aa10.68□□□□□ -0.7
USP11-208ENST00000480104 KLHL38Q2WGJ6 581 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms