RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ACOT4Q8N9L9 421 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 MORN4Q8NDC4 146 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 OR7G3Q8NG95 312 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 KCTD4Q8WVF5 259 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 ASB15Q8WXK1 588 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 NXNL1Q96CM4 212 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 MRRFQ96E11 262 aaKnown RBP13.33□□□□□ -0.28
ATG4B-218ENST00000479554 CMTM7Q96FZ5 175 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 MAPKAP1Q9BPZ7 522 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 ALOXE3Q9BYJ1 711 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 CHST11Q9NPF2 352 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 TIMMDC1Q9NPL8 285 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 KCMF1Q9P0J7 381 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 ERVK-11Q9UQG0 969 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 ANGPTL3Q9Y5C1 460 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 CSMD1Q96PZ7 3565 aa13.33□□□□□ -0.28
ATG4B-218ENST00000479554 FBN2P35556 2912 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 DCHS2Q6V1P9 2916 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 A8MVJ9 347 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SAP18O00422 153 aaKnown RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 PRRG2O14669 202 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 ZNHIT1O43257 154 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SHOX2O60902 331 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 LDB3O75112 727 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 OR2J2O76002 312 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SCELO95171 688 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 GFAPP14136 432 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 PRF1P14222 555 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 TNNI3P19429 210 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 CPN2P22792 545 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 MDH1P40925 334 aaKnown RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SERPINB9P50453 376 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 GPR85P60893 370 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 IRF9Q00978 393 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 DDX39BQ13838 428 aaKnown RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 ZNF630Q2M218 657 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 MROH9Q5TGP6 573 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 C16orf47Q6ZP98 133 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 MDGA2Q7Z553 956 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 MCEMP1Q8IX19 187 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SRRM1Q8IYB3 904 aaKnown RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 CENPLQ8N0S6 344 aaPredicted RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 EID3Q8N140 333 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 RHEBL1Q8TAI7 183 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 AGAP11Q8TF27 550 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SREK1Q8WXA9 508 aaKnown RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 CENPKQ9BS16 269 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 LIN28AQ9H9Z2 209 aaKnown RBP13.32□□□□□ -0.28
ATG4B-218ENST00000479554 SNX15Q9NRS6 342 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 HPF1Q9NWY4 346 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 MYOTQ9UBF9 498 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 VTI1BQ9UEU0 232 aa13.32□□□□□ -0.28
ATG4B-218ENST00000479554 ADGRG4Q8IZF6 3080 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 CCDC189A1A4V9 331 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 TMEM200CA6NKL6 621 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 ENO4A6NNW6 628 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 C17orf105B2RV13 164 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 WWP2O00308 870 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 HS6ST1O60243 411 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 CDC40O60508 579 aaKnown RBP eCLIP13.31□□□□□ -0.28
ATG4B-218ENST00000479554 C2P06681 752 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 MTHFD2P13995 350 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 CNTFP26441 200 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 RAP1GDS1P52306 607 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 GNGT1P63211 74 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 ID2Q02363 134 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 PCDH1Q08174 1060 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 SETDB1Q15047 1291 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 KHDRBS2Q5VWX1 349 aaKnown RBP13.31□□□□□ -0.28
ATG4B-218ENST00000479554 KLC3Q6P597 504 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 IL20RBQ6UXL0 311 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 FGD2Q7Z6J4 655 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 CHERPQ8IWX8 916 aaKnown RBP13.31□□□□□ -0.28
ATG4B-218ENST00000479554 ZFP62Q8NB50 900 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-218ENST00000479554 PSD4Q8NDX1 1056 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 C7orf57Q8NEG2 295 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 C16orf52Q8NHV5 167 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 SLC2A12Q8TD20 617 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 PTPMT1Q8WUK0 201 aaPredicted RBP13.31□□□□□ -0.28
ATG4B-218ENST00000479554 MTBPQ96DY7 904 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 RASL10BQ96S79 203 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 SMC6Q96SB8 1091 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 OR51B5Q9H339 312 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 SSU72Q9NP77 194 aaKnown RBP13.31□□□□□ -0.28
ATG4B-218ENST00000479554 COPS7AQ9UBW8 275 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 ADGRE2Q9UHX3 823 aa13.31□□□□□ -0.28
ATG4B-218ENST00000479554 A0A096LPK6 155 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 E9PLN8 166 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 KRT38O76015 456 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 OR6B1O95007 311 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 SNRPAP09012 282 aaKnown RBP13.3□□□□□ -0.28
ATG4B-218ENST00000479554 COX7A2P14406 83 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 COX6B1P14854 86 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 CHN1P15882 459 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 PTGER4P35408 488 aa13.3□□□□□ -0.28
ATG4B-218ENST00000479554 SOX3P41225 446 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms