RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 TMEM132CQ8N3T6 1108 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 Q8N402 240 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TOP6BLQ8N6T0 577 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 B3GNT7Q8NFL0 401 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 WDR36Q8NI36 951 aaKnown RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 NXPE2Q96DL1 559 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 MTERF3Q96E29 417 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 SHDQ96IW2 340 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 GFM1Q96RP9 751 aaKnown RBP12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 KCNJ15Q99712 375 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TMEM43Q9BTV4 400 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 REG4Q9BYZ8 158 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ARNT2Q9HBZ2 717 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 AMBNQ9NP70 447 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 TMPRSS4Q9NRS4 437 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 RAD18Q9NS91 495 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 NDUFB11Q9NX14 153 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF226Q9NYT6 803 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 POFUT2Q9Y2G5 429 aa12.57□□□□□ -0.4
CNKSR3-204ENST00000479339 GFRA2O00451 464 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 SCAMP3O14828 347 aaKnown RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 MT-CYBP00156 380 aaPredicted RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 DHFRP00374 187 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 HAPLN1P10915 354 aaPredicted RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 WARSP23381 471 aaKnown RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 MAPK1P28482 360 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 MAN2A2P49641 1150 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 NUDT6P53370 316 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 NR6A1Q15406 480 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 FCN2Q15485 313 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 TEAD2Q15562 447 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 MLF2Q15773 248 aaPredicted RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 TUSC1Q2TAM9 212 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF284Q2VY69 593 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 MPP7Q5T2T1 576 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 DNAJB7Q7Z6W7 309 aaPredicted RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 UBE2J2Q8N2K1 259 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 DTWD2Q8NBA8 298 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 ATP6V1C2Q8NEY4 427 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 UTP15Q8TED0 518 aaKnown RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 SLC2A13Q96QE2 648 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 SOSTQ9BQB4 213 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 ACBD6Q9BR61 282 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 CATSPERZQ9NTU4 200 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 IMPAD1Q9NX62 359 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 SIRT5Q9NXA8 310 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 EMC3Q9P0I2 261 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF225Q9UK10 706 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 AP1M2Q9Y6Q5 423 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 MUC6Q6W4X9 2439 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 ZDBF2Q9HCK1 2354 aa12.56□□□□□ -0.4
CNKSR3-204ENST00000479339 A0A0A6YYJ9 748 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 A8MVJ9 347 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM72CH0Y354 149 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 BTN3A1O00481 513 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 OLFM2O95897 454 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF81P51508 661 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 EPHA4P54764 986 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PUDPQ08623 228 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 TAF12Q16514 161 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM174BQ3ZCQ3 159 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM72AQ5TYM5 149 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM72DQ6L9T8 149 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 MAMSTRQ6ZN01 415 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 FAM72BQ86X60 149 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 SLC44A2Q8IWA5 706 aaPredicted RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 SAMD14Q8IZD0 417 aaPredicted RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 TMEM145Q8NBT3 493 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.55□□□□□ -0.45e-6■■■■■ 56.5
CNKSR3-204ENST00000479339 SLC22A8Q8TCC7 542 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 INTS12Q96CB8 462 aaKnown RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 SIPA1Q96FS4 1042 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 KCNC2Q96PR1 638 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PKMYT1Q99640 499 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 SEPT5Q99719 369 aaPredicted RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 DPY30Q9C005 99 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 ZNF334Q9HCZ1 680 aaPredicted RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 MS4A12Q9NXJ0 267 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 ASIC5Q9NY37 505 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PLEKHB1Q9UF11 243 aaPredicted RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 CFAP20Q9Y6A4 193 aaKnown RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 GLYATL1P3A0A0U1RQE8 302 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 A8MXK9 166 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 H3BM21 787 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 STK25O00506 426 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PLOD3O60568 738 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 APOL3O95236 402 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 ANXA8P13928 327 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 GJA1P17302 382 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PRDX3P30048 256 aaKnown RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 LHX1P48742 406 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 ATP12AP54707 1039 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 PLIN5Q00G26 463 aa12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 HNRNPA0Q13151 305 aaKnown RBP12.55□□□□□ -0.4
CNKSR3-204ENST00000479339 AP5B1Q2VPB7 878 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms