RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RAPSNQ13702 412 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 CASP8Q14790 479 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 TLR1Q15399 786 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 MEP1AQ16819 746 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 TCHHL1Q5QJ38 904 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-217ENST00000479161 ACER2Q5QJU3 275 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 C18orf63Q68DL7 685 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 SLC6A19Q695T7 634 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 CUZD1Q86UP6 607 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 PTRH1Q86Y79 214 aaKnown RBP14.45□□□□□ -0.1
C9orf3-217ENST00000479161 CLYBLQ8N0X4 340 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 PTPMT1Q8WUK0 201 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-217ENST00000479161 RBM18Q96H35 190 aaKnown RBP14.45□□□□□ -0.1
C9orf3-217ENST00000479161 TRIM45Q9H8W5 580 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-217ENST00000479161 KCNK13Q9HB14 408 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 STMN3Q9NZ72 180 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 PSME2Q9UL46 239 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 CCL27Q9Y4X3 112 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 TIMM22Q9Y584 194 aa14.45□□□□□ -0.1
C9orf3-217ENST00000479161 SLC28A1O00337 649 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 DYRK3O43781 588 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 FGF17O60258 216 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 LDB3O75112 727 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 MYO1DO94832 1006 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 AIFM1O95831 613 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 CHEK2O96017 543 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 SLC35E2P0CK97 266 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 NEFHP12036 1026 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 GRK2P25098 689 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 HTR6P50406 440 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 PLIN5Q00G26 463 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 FOLH1Q04609 750 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ACSM2AQ08AH3 577 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 SPRED3Q2MJR0 410 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ARL13AQ5H913 290 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 NDUFAF5Q5TEU4 345 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 KANK2Q63ZY3 851 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ACSM2BQ68CK6 577 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 NUDCD3Q8IVD9 361 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 SAMD14Q8IZD0 417 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 C1orf52Q8N6N3 182 aaKnown RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 OR1N1Q8NGS0 311 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 TM4SF18Q96CE8 201 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 TLCD1Q96CP7 247 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ART5Q96L15 291 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 KCNA7Q96RP8 456 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 FAIM2Q9BWQ8 316 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 VIPAS39Q9H9C1 493 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 TMBIM4Q9HC24 238 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ZBTB20Q9HC78 741 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 PNO1Q9NRX1 252 aaKnown RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ARGLU1Q9NWB6 273 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 EHD3Q9NZN3 535 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 ABI3Q9P2A4 366 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 PTGFRNQ9P2B2 879 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 CES1P1Q9UKY3 287 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-217ENST00000479161 PCDHA9Q9Y5H5 950 aa14.44□□□□□ -0.1
C9orf3-217ENST00000479161 FLNBO75369 2602 aaKnown RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 CRCPO75575 148 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 CELA2AP08217 269 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 ALOX15P16050 662 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 H2AFXP16104 143 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TIA1P31483 386 aaKnown RBP eCLIP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TRHRP34981 398 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TNFSF10P50591 281 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 INAQ16352 499 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 UGT3A2Q3SY77 523 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 NADK2Q4G0N4 442 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 SLC48A1Q6P1K1 146 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 RPS19BP1Q86WX3 136 aaKnown RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 SIRT6Q8N6T7 355 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 Q8NA96 180 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 OR4K14Q8NGD5 310 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 DGAT2Q96PD7 388 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 BARD1Q99728 777 aaKnown RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 MECRQ9BV79 373 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 CENPHQ9H3R5 247 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TNFRSF12AQ9NP84 129 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 PFDN4Q9NQP4 134 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TEX10Q9NXF1 929 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TRAF6Q9Y4K3 522 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 DNAJC15Q9Y5T4 150 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 MYO18BQ8IUG5 2567 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 SHANK1Q9Y566 2161 aa14.43□□□□□ -0.1
C9orf3-217ENST00000479161 TRAV17A0A0B4J275 112 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 OR5H15A6NDH6 313 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 TMEM114B3SHH9 223 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 RGS14O43566 566 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 SLC28A2O43868 658 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 ZFAND5O76080 213 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 DDAH2O95865 285 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 GBAP04062 536 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 IGKV3-11P04433 115 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 IFNA16P05015 189 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 SERPINE1P05121 402 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 PLA2G2AP14555 144 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 CHN1P15882 459 aa14.42□□□□□ -0.1
C9orf3-217ENST00000479161 PIK3R1P27986 724 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms