RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PTX3P26022 381 aaPredicted RBP10.27□□□□□ -0.76
VPS52-217ENST00000478934 BSGP35613 385 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 SOX3P41225 446 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 LIMS1P48059 325 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.27□□□□□ -0.76
VPS52-217ENST00000478934 SLC46A3Q7Z3Q1 461 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 C11orf74Q86VG3 221 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 AMZ2Q86W34 360 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 HOMEZQ8IX15 550 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 CYP4Z2PQ8N1L4 340 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 PARP16Q8N5Y8 322 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 LINC01555Q8NAE3 123 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 JPH3Q8WXH2 748 aaPredicted RBP10.27□□□□□ -0.76
VPS52-217ENST00000478934 ANKRA2Q9H9E1 313 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 KCNK12Q9HB15 430 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 ERVK13-1Q9NX77 482 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 DEC1Q9P2X7 70 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 SERGEFQ9UGK8 458 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 POFUT2Q9Y2G5 429 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 KLHL20Q9Y2M5 609 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 FAM32AQ9Y421 112 aaKnown RBP10.27□□□□□ -0.76
VPS52-217ENST00000478934 SCN2AQ99250 2005 aa10.27□□□□□ -0.76
VPS52-217ENST00000478934 HEATR5BQ9P2D3 2071 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 PRUNE2Q8WUY3 3088 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 PNMA8CA0A1B0GUJ8 204 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 SMIM30A4D0T7 59 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 AGAP5A6NIR3 686 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 PSMD11O00231 422 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 WWP2O00308 870 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 CTDSP2O14595 271 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 PI15O43692 258 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 CCNB2O95067 398 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 CBLP22681 906 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 GRK3P35626 688 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 CLCNKAP51800 687 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 SELENBP1Q13228 472 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 SYPL1Q16563 259 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 C10orf62Q5T681 223 aaPredicted RBP10.27□□□□□ -0.77
VPS52-217ENST00000478934 DEPDC1Q5TB30 811 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 AGAP7PQ5VUJ5 663 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 KHDRBS2Q5VWX1 349 aaKnown RBP10.27□□□□□ -0.77
VPS52-217ENST00000478934 DEF8Q6ZN54 512 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 ERN2Q76MJ5 926 aaKnown RBP10.27□□□□□ -0.77
VPS52-217ENST00000478934 C6orf120Q7Z4R8 191 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 ADCK2Q7Z695 626 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 UBE3DQ7Z6J8 389 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 GEMIN6Q8WXD5 167 aaKnown RBP10.27□□□□□ -0.77
VPS52-217ENST00000478934 SMG7Q92540 1137 aaKnown RBP10.27□□□□□ -0.77
VPS52-217ENST00000478934 CXorf40BQ96DE9 158 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 NLNQ9BYT8 704 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 AICDAQ9GZX7 198 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 KLHL31Q9H511 634 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 THSD1Q9NS62 852 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 WDR70Q9NW82 654 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 CLEC2DQ9UHP7 191 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 ENPP4Q9Y6X5 453 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 TRIOO75962 3097 aa10.27□□□□□ -0.77
VPS52-217ENST00000478934 LRRTM2O43300 516 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 OR1F1O43749 312 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 DPM1O60762 260 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 EFCAB14O75071 495 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ADH1CP00326 375 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ANXA8P13928 327 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SERPINB1P30740 379 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PIK3CBP42338 1070 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SOX9P48436 509 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 RGS6P49758 472 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 FADDQ13158 208 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ELAVL3Q14576 367 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 TBCEQ15813 527 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 WSCD2Q2TBF2 565 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SPDYE7PQ495Y7 208 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 CCDC80Q76M96 950 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 PDZD3Q86UT5 571 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 C17orf64Q86WR6 236 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ARMC8Q8IUR7 673 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SLC7A5P1Q8MH63 180 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 IQCF1Q8N6M8 205 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ZNF557Q8N988 423 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 MYDGFQ969H8 173 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 RAD51AP1Q96B01 352 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 OTUB2Q96DC9 234 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ZCCHC2Q9C0B9 1178 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 OSGEPL1Q9H4B0 414 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 MVB12BQ9H7P6 319 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SYNPO2LQ9H987 977 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ZNF556Q9HAH1 456 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 SIAEQ9HAT2 523 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 EXOSC4Q9NPD3 245 aaKnown RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 SIRT3Q9NTG7 399 aaPredicted RBP10.26□□□□□ -0.77
VPS52-217ENST00000478934 FKBP14Q9NWM8 211 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 DNAJC27Q9NZQ0 273 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 IFT52Q9Y366 437 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 EDDM13A0A1B0GTR0 161 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 A0A1W2PPV9 198 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 LINC01553A4QN01 128 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 C4orf51C9J302 202 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 ANHXE9PGG2 379 aa10.26□□□□□ -0.77
VPS52-217ENST00000478934 HMGN4O00479 90 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms