RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 KCNJ16Q9NPI9 418 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 B4GALT7Q9UBV7 327 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 BOKQ9UMX3 212 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 IQANK1A0A1B0GTG1 560 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 PRKNO60260 465 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 OR10H2O60403 315 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 PRAMEF4O60810 478 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 PDE9AO76083 593 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 ALOX15P16050 662 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 EPORP19235 508 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 SERPINB8P50452 374 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 ALDH18A1P54886 795 aaKnown RBP13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 IGLV3-21P80748 117 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 SLAMF1Q13291 335 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 SETDB1Q15047 1291 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 ACAP2Q15057 778 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 PRAMEF9Q5VWM5 478 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 MYO7BQ6PIF6 2116 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 CYP20A1Q6UW02 462 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 UBE3DQ7Z6J8 389 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 ST13P4Q8IZP2 240 aaPredicted RBP13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 MYRIPQ8NFW9 859 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 OR52N2Q8NGI0 321 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 HUS1BQ8NHY5 278 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 SARAFQ96BY9 339 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 FBXL20Q96IG2 436 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 ENKD1Q9H0I2 346 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 DEFB127Q9H1M4 99 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 LDAHQ9H6V9 325 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 EXO5Q9H790 373 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 DMRT3Q9NQL9 472 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 PYCARDQ9ULZ3 195 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 TMCO1Q9UM00 188 aa13.38□□□□□ -0.27
SMARCE1-209ENST00000478349 TMEM200CA6NKL6 621 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 CAPN14A8MX76 684 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 NPIPA2E9PIF3 369 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 NPIPA3F8WFD2 350 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 H0YIV9 168 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 RTCAO00442 366 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 FGF17O60258 216 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 SUSD5O60279 629 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 WDR1O75083 606 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 IGHG3P01860 377 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 HOXD4P09016 255 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 NR2F6P10588 404 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 PYGBP11216 843 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 ACVR2AP27037 513 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 SERPINB3P29508 390 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 MAN2A2P49641 1150 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 TMED10P49755 219 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 KCNJ2P63252 427 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 ID2Q02363 134 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 TLE4Q04727 773 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 CUL3Q13618 768 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 WLSQ5T9L3 541 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 SLC22A10Q63ZE4 541 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 C8orf74Q6P047 294 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 NCCRP1Q6ZVX7 275 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 NUDT13Q86X67 352 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 CLYBLQ8N0X4 340 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 LILRB4Q8NHJ6 448 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF721Q8TF20 911 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 ANKRD9Q96BM1 317 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 SCYL1Q96KG9 808 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 OR51B5Q9H339 312 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 LIN28AQ9H9Z2 209 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 MCCC2Q9HCC0 563 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 IGSF5Q9NSI5 407 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 DEPPQ9NTK1 212 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 CNIH4Q9P003 139 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 MTRF1LQ9UGC7 380 aaKnown RBP13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 IKBKGQ9Y6K9 419 aa13.37□□□□□ -0.27
SMARCE1-209ENST00000478349 C19orf84I3L1E1 186 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 SAP18O00422 153 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 AQP7O14520 342 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 HCN1O60741 890 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 SH3BGRLO75368 114 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 FAM155BO75949 473 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 GLSO94925 669 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 KLHL2O95198 593 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 C1QAP02745 245 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 GABRA1P14867 456 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 TYK2P29597 1187 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 KIR3DL1P43629 444 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 ETF1P62495 437 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 FOLH1Q04609 750 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 ASPHQ12797 758 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 PCBP2Q15366 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 UAP1Q16222 522 aaPredicted RBP13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 PFKFB4Q16877 469 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 HYAL4Q2M3T9 481 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 PIGGQ5H8A4 983 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
SMARCE1-209ENST00000478349 MROH9Q5TGP6 573 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms