RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 STYXL1Q9Y6J8 313 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 RP1P56715 2156 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 PKDREJQ9NTG1 2253 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 SCN1AP35498 2009 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 C5orf60A6NFR6 353 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 PGPEP1LA6NFU8 196 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 PRSS47A8MTI9 375 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 K7EM74 188 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 HCRTO43612 131 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 DPM1O60762 260 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 WISP2O76076 250 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 GAS8-AS1O95177 125 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 SCGB1D1O95968 90 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 FGF5P12034 268 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 COX6B1P14854 86 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 PAX1P15863 534 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ZNF23P17027 643 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 GM2AP17900 193 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ANXA7P20073 488 aaKnown RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 DRD3P35462 400 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 KRT2P35908 639 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ARL3P36405 182 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 PPARGP37231 505 aaPredicted RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 PSMD8P48556 350 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 DCAF7P61962 342 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 TRA2AQ13595 282 aaKnown RBP eCLIP4.23□□□□□ -1.73
VPS50-214ENST00000477935 FZD2Q14332 565 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 PCGF3Q3KNV8 242 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 RAB6CQ53S08 254 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ZNF542PQ5EBM4 170 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 VWA2Q5GFL6 755 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 DCAF12Q5T6F0 453 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 SARM1Q6SZW1 724 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 CCDC190Q86UF4 302 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 HORMAD1Q86X24 394 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 KLHDC8BQ8IXV7 354 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 SLC22A18ASQ8N1D0 253 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ZBTB8BQ8NAP8 495 aaPredicted RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 HJURPQ8NCD3 748 aaPredicted RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 RBM15BQ8NDT2 890 aaKnown RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 CHDHQ8NE62 594 aaPredicted RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 TRPC4APQ8TEL6 797 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 POMGNT1Q8WZA1 660 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 STARD8Q92502 1023 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 FBXO17Q96EF6 278 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 SMARCD1Q96GM5 515 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 HPDLQ96IR7 371 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ST6GAL2Q96JF0 529 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 SPAG5Q96R06 1193 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 RAB6CQ9H0N0 254 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 FAM118AQ9NWS6 357 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 STOML2Q9UJZ1 356 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 PILRAQ9UKJ1 303 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 RNF215Q9Y6U7 377 aa4.23□□□□□ -1.73
VPS50-214ENST00000477935 ZNF469Q96JG9 3925 aaPredicted RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 DIDO1Q9BTC0 2240 aaKnown RBP4.23□□□□□ -1.73
VPS50-214ENST00000477935 ACANP16112 2415 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 A0A1B0GUH1 482 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 A8MXQ7 604 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 ANKRD66B4E2M5 251 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 E9PMD0 336 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 SMAD9O15198 467 aaKnown RBP4.22□□□□□ -1.73
VPS50-214ENST00000477935 LRRTM2O43300 516 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 PLPP2O43688 288 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 DUX1O43812 170 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 CTSVO60911 334 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 MOCS3O95396 460 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 CPNE6O95741 557 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 HIST1H2ABP04908 130 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 PRSS1P07477 247 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 ALPIP09923 528 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 CFC1BP0CG36 223 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 CFC1P0CG37 223 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 TMEM11P17152 192 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 TRIM21P19474 475 aaKnown RBP4.22□□□□□ -1.73
VPS50-214ENST00000477935 HIST1H2ADP20671 130 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 NR2F2P24468 414 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 CDKN1AP38936 164 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 GTF2BQ00403 316 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 ELOCQ15369 112 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 NADK2Q4G0N4 442 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 KRT79Q5XKE5 535 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 ACSM2BQ68CK6 577 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 BLOC1S2Q6QNY1 142 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 IKBIPQ70UQ0 350 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 HIST3H2AQ7L7L0 130 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 PIWIL4Q7Z3Z4 852 aaKnown RBP4.22□□□□□ -1.73
VPS50-214ENST00000477935 EPHX4Q8IUS5 362 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 ARHGAP18Q8N392 663 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 SLC5A8Q8N695 610 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 GCSAMQ8N6F7 178 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 SYT2Q8N9I0 419 aaPredicted RBP4.22□□□□□ -1.73
VPS50-214ENST00000477935 FIBINQ8TAL6 211 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 PPP4R1Q8TF05 950 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 PNPLA2Q96AD5 504 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 SCRN2Q96FV2 425 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 ZNF274Q96GC6 653 aaPredicted RBP4.22□□□□□ -1.73
VPS50-214ENST00000477935 OXNAD1Q96HP4 312 aaPredicted RBP4.22□□□□□ -1.73
VPS50-214ENST00000477935 ANKRD36BP1Q96IX9 119 aa4.22□□□□□ -1.73
VPS50-214ENST00000477935 BMFQ96LC9 184 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms